Gene
| Gene Model ID | pfu_aug2.0_150.1_00326 |
|---|---|
| Locus | scaffold150.1 : 271708 ... 279936 : + |
| To GenomeBrowser | scaffold150.1:271708..279936 |
| Genes list of scaffold | scaffold150.1 |
| Synonym | pfu_aug1.0_2122.1_44246 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_150.1_00326.t1 | 6 | 1 | zf-met2 | 316 | 353 | 1.7e-11 | 43.8 | 4.1e-06 | 0.0036 | 17.2 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 1 | zf-C2H2 | 317 | 340 | 1.5e-07 | 31.2 | 0.0012 | 1.0 | 9.8 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 1 | zf-C2H2_4 | 317 | 340 | 8.1e-07 | 28.9 | 0.00042 | 0.37 | 11.2 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 2 | zf-C2H2 | 393 | 416 | 1.5e-07 | 31.2 | 0.00076 | 0.66 | 10.4 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 2 | zf-C2H2_4 | 393 | 416 | 8.1e-07 | 28.9 | 0.0012 | 1.0 | 9.8 |
| pfu_aug2.0_150.1_00326.t1 | 6 | 2 | zf-met2 | 394 | 422 | 1.7e-11 | 43.8 | 0.00015 | 0.13 | 12.2 |
| pfu_aug2.0_150.1_00326.t1 | 6 | 3 | zf-met2 | 490 | 518 | 1.7e-11 | 43.8 | 0.0013 | 1.1 | 9.2 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 3 | zf-C2H2 | 490 | 513 | 1.5e-07 | 31.2 | 0.0016 | 1.4 | 9.4 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 3 | zf-C2H2_4 | 490 | 513 | 8.1e-07 | 28.9 | 0.002 | 1.8 | 9.1 |
| pfu_aug2.0_150.1_00326.t1 | 6 | 4 | zf-met2 | 587 | 619 | 1.7e-11 | 43.8 | 0.0023 | 2.0 | 8.4 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 4 | zf-C2H2 | 587 | 610 | 1.5e-07 | 31.2 | 0.014 | 12.0 | 6.4 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 4 | zf-C2H2_4 | 587 | 607 | 8.1e-07 | 28.9 | 0.0067 | 5.8 | 7.4 |
| pfu_aug2.0_150.1_00326.t1 | 6 | 5 | zf-met2 | 660 | 687 | 1.7e-11 | 43.8 | 0.0012 | 1.0 | 9.3 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 5 | zf-C2H2 | 661 | 683 | 1.5e-07 | 31.2 | 0.00024 | 0.21 | 12.0 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 5 | zf-C2H2_4 | 661 | 683 | 8.1e-07 | 28.9 | 0.036 | 32.0 | 5.1 |
| pfu_aug2.0_150.1_00326.t1 | 6 | 6 | zf-met2 | 738 | 758 | 1.7e-11 | 43.8 | 0.014 | 12.0 | 5.9 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 6 | zf-C2H2 | 739 | 759 | 1.5e-07 | 31.2 | 2.6e-05 | 0.023 | 15.0 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 6 | zf-C2H2_4 | 739 | 760 | 8.1e-07 | 28.9 | 0.014 | 12.0 | 6.5 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 7 | zf-C2H2 | 770 | 776 | 1.5e-07 | 31.2 | 9.3 | 8100.0 | -2.5 |
| pfu_aug2.0_150.1_00326.t1 | 7 | 7 | zf-C2H2_4 | 770 | 777 | 8.1e-07 | 28.9 | 8.9 | 7800.0 | -2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_150.1_00326.t1 | gi|591351471|ref|XP_007070186.1| | PREDICTED: zinc finger protein 850-like, partial [Chelonia mydas] | 5.0e-08 |
| pfu_aug2.0_150.1_00326.t1 | gi|545222035|ref|XP_005611919.1| | PREDICTED: zinc finger protein 850-like isoform X1 [Equus caballus] | 3.0e-07 |
| pfu_aug2.0_150.1_00326.t1 | gi|657800121|ref|XP_008327189.1| | PREDICTED: gastrula zinc finger protein XlCGF26.1-like isoform X1 [Cynoglossus semilaevis] | 4.0e-07 |
| pfu_aug2.0_150.1_00326.t1 | gi|545222037|ref|XP_005611920.1| | PREDICTED: zinc finger protein 850-like isoform X2 [Equus caballus] | 4.0e-07 |
| pfu_aug2.0_150.1_00326.t1 | gi|706115831|ref|XP_010194524.1| | PREDICTED: PR domain zinc finger protein 5 [Colius striatus] | 5.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_150.1_00326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_150.1_00326.t1 atggattcaagcgcagatactggcatgcggtatgtaggatattactatgaggtcaaaggtcaagtgaagttctcaatgct tggtaacatctcaataccttggagagatggccgtatcactattgcttgtaaaccatttgggtggatgttttacctctttg aaggagcacctcataaaccaccaaaatctttcaaggtaaggatatgcttcaaggaaattcagcacaaaagtaatccctca tatatcttccaattttcagaggactcatttagacccaagggaaggtttggtccctatccagagagagatgtttacgaagc tcagcgagtgctggaggtattggtacagcaaagtaggagtcgtagtattcgtcatattctacagaaagctgagggtgaat cgacattgtctgatctgtccgatatctccgatacagaccttgatgatgaggatgacgtccaggataaaagttctacagat ataggatctgacagcatgagtaaattacgaccagaaccactttatgcagtggattcaatataccaggctggggatttggt aacaagcatgacagatcttcagtccggaaatgagatgagtaaaaaagttggcgaatcatcattggcagatcaagatggtt cttgtagtgcatctagatctgcatcaacactaccagaaagaaaaagaaaaaattctgaaaaatctgagattagagaagca gaaaatgtcccgttgagaaaaatgtctgaaggtacaaagaaaaccgatgcatctaatgacctgaagaggaaaggctcaaa attggactccgatgtatcaacaaactccaaggtgaagaaaatgcatattgaagccaatagtgaaggaaacgaacctgtat acttgagtaacagagattctaagagggttagagaacctatccctgctcagtcttatttatcaccaaattaccaatgttca gagtgttatatgaagtttcaatcgaagagatctcttgctttacatctagagtctaagcatggaattgtgaattcaaccag catatcaggttgccagccaaatacatcatctttacccatcagaacggaacaacgtgcagatgaatccactaattctttgg ggaaagaggattatcctccccaaagagtgagccccacttcaacaagtggctctccattcagttgttccaaatgtaatatg aagttcttatccagcaaatctctgaacatacatttggaggcaaaacatggacagaaaaaagtaaaggctgtgaattcaaa cattttgttaacaatgtggacagctggtacacacacaagcaaatttgatgttaatgagagtgatggtagttctgttccta ataaatcaaacagtgtggaaaaagttacagataaaccaactaacacggttaacatagagaaatcttcttctcaaagctca aatgcaagtacgtcgagcagctctcaattcagttgttcaaaatgcggtatgaggttcttatctatcaggtctctaaacat acatttggaagcaaaacatggccagaagaaagtaaataccgtggattcagacgttatgtcaccaataccgaaaactggtc cacttacaagcaaactagttcaacctgaagttgatgttggttgtgctataaaagaatcaaacggtgatagaaaaatcaga aataaacctgctaatgccgttaacatagaaaaatctactcctcaaagctcaaacacaagtatgttaagcagccctacgtt caattgcccaaagtgtagtatgaagttcttattcagtaaatctctggacttgcatttggaactaaaacatggccagaaga aagtaaacactgcattttcaaatgattcgccaccagtgaccaacaatggtccacttgcagacaaattggtagtatcggag gatgattttggtttggttcccaatgaatggtccctccctgctagtgctaaacaagaagttaaatgttcagactgtgacat gaagtttctttcaccaaaatctttgaaagttcataaagaagcaaaacactgcaaaggaaatgcagtatcttcaaatgaaa gtaggctgttaacaaataaaagtaatggaagttccatgtggcaagacaaagctgtttcaaagaagaaagatgaaaaacaa acaacatggaagaaaaaaatgaaggaaagaagaaagcaagagaaattagctaaatacaaatgcaagacttgtggcatggg atttctcaaacagaaatctttggagaaacatatggacaaatattctaccgagaatcatgaagtttactttatttgcttta tttgtggtcattatttgtggggagtgtttccagtctgtttataa |
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Protein
| Protein ID | pfu_aug2.0_150.1_00326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_150.1_00326.t1 MDSSADTGMRYVGYYYEVKGQVKFSMLGNISIPWRDGRITIACKPFGWMFYLFEGAPHKPPKSFKVRICFKEIQHKSNPS YIFQFSEDSFRPKGRFGPYPERDVYEAQRVLEVLVQQSRSRSIRHILQKAEGESTLSDLSDISDTDLDDEDDVQDKSSTD IGSDSMSKLRPEPLYAVDSIYQAGDLVTSMTDLQSGNEMSKKVGESSLADQDGSCSASRSASTLPERKRKNSEKSEIREA ENVPLRKMSEGTKKTDASNDLKRKGSKLDSDVSTNSKVKKMHIEANSEGNEPVYLSNRDSKRVREPIPAQSYLSPNYQCS ECYMKFQSKRSLALHLESKHGIVNSTSISGCQPNTSSLPIRTEQRADESTNSLGKEDYPPQRVSPTSTSGSPFSCSKCNM KFLSSKSLNIHLEAKHGQKKVKAVNSNILLTMWTAGTHTSKFDVNESDGSSVPNKSNSVEKVTDKPTNTVNIEKSSSQSS NASTSSSSQFSCSKCGMRFLSIRSLNIHLEAKHGQKKVNTVDSDVMSPIPKTGPLTSKLVQPEVDVGCAIKESNGDRKIR NKPANAVNIEKSTPQSSNTSMLSSPTFNCPKCSMKFLFSKSLDLHLELKHGQKKVNTAFSNDSPPVTNNGPLADKLVVSE DDFGLVPNEWSLPASAKQEVKCSDCDMKFLSPKSLKVHKEAKHCKGNAVSSNESRLLTNKSNGSSMWQDKAVSKKKDEKQ TTWKKKMKERRKQEKLAKYKCKTCGMGFLKQKSLEKHMDKYSTENHEVYFICFICGHYLWGVFPVCL |
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