Gene
| Gene Model ID | pfu_aug2.0_150.1_00328 |
|---|---|
| Locus | scaffold150.1 : 293786 ... 349674 : - |
| To GenomeBrowser | scaffold150.1:293786..349674 |
| Genes list of scaffold | scaffold150.1 |
| Synonym | pfu_aug1.0_2122.1_44243 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_150.1_00328.t1 | 4 | 1 | Ldl_recept_a | 51 | 86 | 4.5e-17 | 61.6 | 2.8e-10 | 5.2e-07 | 29.4 |
| pfu_aug2.0_150.1_00328.t1 | 4 | 2 | Ldl_recept_a | 318 | 353 | 4.5e-17 | 61.6 | 2.1e-09 | 3.9e-06 | 26.6 |
| pfu_aug2.0_150.1_00328.t1 | 4 | 3 | Ldl_recept_a | 358 | 376 | 4.5e-17 | 61.6 | 0.14 | 250.0 | 1.6 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 1 | LRR_8 | 378 | 393 | 1.2e-34 | 117.8 | 0.58 | 1100.0 | -0.6 |
| pfu_aug2.0_150.1_00328.t1 | 4 | 4 | Ldl_recept_a | 401 | 435 | 4.5e-17 | 61.6 | 6.8e-07 | 0.0013 | 18.6 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 2 | LRR_8 | 488 | 544 | 1.2e-34 | 117.8 | 5.9e-08 | 0.00011 | 21.8 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 1 | LRR_4 | 488 | 503 | 1.4e-23 | 82.0 | 0.015 | 28.0 | 4.4 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 1 | LRR_1 | 488 | 503 | 5.6e-15 | 53.0 | 0.34 | 630.0 | 1.1 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 3 | LRR_8 | 511 | 560 | 1.2e-34 | 117.8 | 5.9e-08 | 0.00011 | 21.8 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 2 | LRR_4 | 512 | 548 | 1.4e-23 | 82.0 | 1.9e-08 | 3.4e-05 | 23.3 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 2 | LRR_1 | 513 | 528 | 5.6e-15 | 53.0 | 0.00014 | 0.26 | 11.4 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 3 | LRR_1 | 533 | 549 | 5.6e-15 | 53.0 | 0.0038 | 7.0 | 7.1 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 4 | LRR_1 | 554 | 567 | 5.6e-15 | 53.0 | 0.077 | 140.0 | 3.1 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 3 | LRR_4 | 602 | 639 | 1.4e-23 | 82.0 | 1.5e-07 | 0.00028 | 20.4 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 4 | LRR_8 | 603 | 659 | 1.2e-34 | 117.8 | 6.8e-13 | 1.3e-09 | 37.7 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 5 | LRR_1 | 603 | 620 | 5.6e-15 | 53.0 | 0.00038 | 0.7 | 10.1 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 4 | LRR_4 | 624 | 660 | 1.4e-23 | 82.0 | 5.3e-07 | 0.00098 | 18.6 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 6 | LRR_1 | 624 | 646 | 5.6e-15 | 53.0 | 0.053 | 98.0 | 3.6 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 5 | LRR_8 | 648 | 707 | 1.2e-34 | 117.8 | 3.3e-14 | 6.1e-11 | 41.9 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 5 | LRR_4 | 649 | 684 | 1.4e-23 | 82.0 | 4.8e-05 | 0.089 | 12.4 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 7 | LRR_1 | 649 | 670 | 5.6e-15 | 53.0 | 0.00011 | 0.2 | 11.8 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 8 | LRR_1 | 674 | 688 | 5.6e-15 | 53.0 | 0.011 | 20.0 | 5.6 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 6 | LRR_8 | 696 | 754 | 1.2e-34 | 117.8 | 2.6e-12 | 4.8e-09 | 35.8 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 6 | LRR_4 | 696 | 735 | 1.4e-23 | 82.0 | 2.6e-08 | 4.8e-05 | 22.8 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 9 | LRR_1 | 696 | 717 | 5.6e-15 | 53.0 | 0.00027 | 0.49 | 10.6 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 10 | LRR_1 | 720 | 735 | 5.6e-15 | 53.0 | 0.016 | 30.0 | 5.1 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 7 | LRR_8 | 743 | 797 | 1.2e-34 | 117.8 | 1.5e-11 | 2.7e-08 | 33.4 |
| pfu_aug2.0_150.1_00328.t1 | 7 | 7 | LRR_4 | 743 | 776 | 1.4e-23 | 82.0 | 3.4e-08 | 6.3e-05 | 22.4 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 11 | LRR_1 | 743 | 764 | 5.6e-15 | 53.0 | 4.8e-05 | 0.09 | 12.8 |
| pfu_aug2.0_150.1_00328.t1 | 12 | 12 | LRR_1 | 767 | 776 | 5.6e-15 | 53.0 | 0.023 | 42.0 | 4.7 |
| pfu_aug2.0_150.1_00328.t1 | 1 | 1 | 7tm_1 | 847 | 1108 | 2.3e-30 | 105.5 | 2.0e-33 | 3.7e-30 | 104.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_150.1_00328.t1 | gi|676489412|ref|XP_009064926.1| | hypothetical protein LOTGIDRAFT_132442 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_150.1_00328.t1 | gi|676443516|ref|XP_009050139.1| | hypothetical protein LOTGIDRAFT_142042, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_150.1_00328.t1 | gi|485836813|tpg|DAA64490.1| | 0.0 | |
| pfu_aug2.0_150.1_00328.t1 | gi|676437734|ref|XP_009048300.1| | hypothetical protein LOTGIDRAFT_140100 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_150.1_00328.t1 | gi|390343582|ref|XP_789319.3| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_150.1_00328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_150.1_00328.t1 atgcaatcaaaagagttttgtaggtcctttataaaagaggatctgagagatcgtagtagcaacacagcaagtgatatgag gaattttacacagagatggtttattgtgatctgcctcatatcaggcactgtcaacacggaagatccattgtgttcagctg gtcagtatcgctgtttctacgactccgagtgtataccaatggagaaattctgtgatgacataccagactgtactgacaat actgacgaatccaattgtgagaacgagtgtctttcccgccatgacatattcggggagcattataaaggcaggaggcaaag tggtatcccggtcacaggcaacaaatatgttaactgcaccacacagtgtcgtggtgaggcagatatagggcttatttgca aaacatggagcaatcagactgcattttgcgacgttcccttttgtggttcgatgtcggcaaaggatgtcaactgcgaattt cagaaagatttctgtggctacacgatattggatcgtgcaaacaatgtggatgtgctaaatgaacattacgtatgggaaga tatgggaatcgtcgcaatcaacgtgtccaagccaatgaagcaaaggaaactgctaatggccagtaagatattaactattc cggatgccacaaaatccgtgtgtgtacagataagatacaatgttggtctgtcccggggacgaaaggattcctactggagg cttaaattagctctatctaatctatgtagtatcagcaggttttcccctgaaaactgcacagactgtgtcatgaagtgttt tgctaacacaagtatcaccaagcaggtgaaggttcgtgtggatatacagattgaaagaaaaacagatgccttcatatcag ggacgttcagcttgttatatattcaggtcacaaggggagagtgcaacgactccacagagaagctaatcgacgaatgtaca gatgatgaatttaaatgtgatgacttgacttgtatcccattggtagatacgtgtgacgggtacggtgactgccctgataa ctcagatgaactcttctgtaggcaatatctgaaatgcggagatgaagaaatctactgcgagtatgccaatcgatgtgtcc ctcagtacaaagatttaattcaaaatctcactgatatatgtcacactacgtttttccattttaaaacaccatcgctttgt ccaaatgactttacatgcaaaggatataacaacaactgcctatcaacaaacgaagtttgtgatggcaaaccccagtgtgt ccatggtgatgatgaaattggatgcgtcaaaaattgcccgcgtggctgcacgtgccggggattgagtttcgaatcgtgtc cttctgattcacttcctgatatacctttgatcgcagctcatattgatttgtctggcaaggatgtgaacatgagtctgctg tgtctggggtataggaccttacttgtcaaattaaacttgtcaaacactggaatagacgatgttacatgcctctctacaaa tttgatgtttccagctttgcgtatacttgacttgtccttcaacaatatcacaactttacacaagttacaattgccaagct tggagaaattatacttggatcataatccaatccaacgtattgaatcaaaattgagctttacgtcgctttccctctccaat tgtgacttgaaccatctagaatgggaaaacgccggttccatcagtaatggtatactatccgctgctcataccagcaatca gagcgagatatacccatttctatattatatgaacaacttgtgctatctaaggaaactcgatcttagctccaatagacttt cccatttcggatattttggagaatgtcagtcattagtttcattggatctctccttaaataccatttcatccctctcattt cattcgtttaatggacttacgctcttagagcgccttgatcttagtcacaataagttgcaattgatctcgagggagtattt tcaagaattgtacgaggttaaattattgaatctcagcaacaacaaaattacattcatcaatgagaagtcttttatagatt tatggagcttgataagattagatctgagccgaaacaacataaagaaattagatttcggcatttttgaaaatcagaacaat cttctttatttatatttagagaacaacggactttcaaagataagcaggaccagagcctctctcgagtctttacagctctt gaatctcagaggaaacagcattgtccacataccatacgggttctttgaaacccttaacaatcttaaaactcttgatataa gtggtaaccttgttattcctcaaaagaccacgttcaatggtcttggcgttctacgatatatgaatgtagatagttttgtt ttatgctgcattcgaccagtaagtgtagaagaatcaaactgcaaatctccgaacgacattttttcttcgtgtgccaattt gatagattttggtattctccatgtgtgtatctggtttacggctgcactttccttgattggaaatatgtttgccctgatag caaggattcgaaaaggcacgtggattcatgagtcacgtgacgtgcttgtgaccaacctctgtatctccgactttttgatg ggcatataccttatcatagtggcatacatggatgttcagacacgaggtcaatatggcctacatcataacgaatggaaacg tagcgttctatgtaaaatagcaggtgtgctcgtttctgtttccagtgaggcttctacgctctgtattttggctataacga tggacagatacatacttttcaggaacccattgtcgctcagaaaacagtccctgaagtctgcctatataacagtggcgctg atttggatcctctctatattagtggccacccttccattttcctggaggcagaatgaggacgataatttctacggtcgcag cagtgtttgtatatcacttcccttgaccaagagaacattgacctttaaaggatgggagtattccttcgctgtctttattg gactcaatttgtttatatatcttggagttgtcataggtcagatagttatctataaacagattctggcttataacacatgc gtgaagtcggacaagaaaaaacaaagggaaatcgccgtggccaagtctttgtcagcagttgtcatcagcgatacattgtg ctggttaccgattgccattataggttgcatggccattggaggagttgacatctcaaatgacgtttacgcgtggataatag tgttcgtactgccgcttaattctgccattaatcctttcctgtacacactgacttcttaccggaaacaacagataattcac tgcgatgtcccaccttacaaacagaacataaccgaaccaaaggagattagtttagaactgacattcataaaagaaaggag aatatcctcacaagtgtcactttactacattcctgaagaatgccatgagggaagaaaactaccaagctgtcttcgaaaat tgtcagtttaa |
|
Protein
| Protein ID | pfu_aug2.0_150.1_00328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_150.1_00328.t1 MQSKEFCRSFIKEDLRDRSSNTASDMRNFTQRWFIVICLISGTVNTEDPLCSAGQYRCFYDSECIPMEKFCDDIPDCTDN TDESNCENECLSRHDIFGEHYKGRRQSGIPVTGNKYVNCTTQCRGEADIGLICKTWSNQTAFCDVPFCGSMSAKDVNCEF QKDFCGYTILDRANNVDVLNEHYVWEDMGIVAINVSKPMKQRKLLMASKILTIPDATKSVCVQIRYNVGLSRGRKDSYWR LKLALSNLCSISRFSPENCTDCVMKCFANTSITKQVKVRVDIQIERKTDAFISGTFSLLYIQVTRGECNDSTEKLIDECT DDEFKCDDLTCIPLVDTCDGYGDCPDNSDELFCRQYLKCGDEEIYCEYANRCVPQYKDLIQNLTDICHTTFFHFKTPSLC PNDFTCKGYNNNCLSTNEVCDGKPQCVHGDDEIGCVKNCPRGCTCRGLSFESCPSDSLPDIPLIAAHIDLSGKDVNMSLL CLGYRTLLVKLNLSNTGIDDVTCLSTNLMFPALRILDLSFNNITTLHKLQLPSLEKLYLDHNPIQRIESKLSFTSLSLSN CDLNHLEWENAGSISNGILSAAHTSNQSEIYPFLYYMNNLCYLRKLDLSSNRLSHFGYFGECQSLVSLDLSLNTISSLSF HSFNGLTLLERLDLSHNKLQLISREYFQELYEVKLLNLSNNKITFINEKSFIDLWSLIRLDLSRNNIKKLDFGIFENQNN LLYLYLENNGLSKISRTRASLESLQLLNLRGNSIVHIPYGFFETLNNLKTLDISGNLVIPQKTTFNGLGVLRYMNVDSFV LCCIRPVSVEESNCKSPNDIFSSCANLIDFGILHVCIWFTAALSLIGNMFALIARIRKGTWIHESRDVLVTNLCISDFLM GIYLIIVAYMDVQTRGQYGLHHNEWKRSVLCKIAGVLVSVSSEASTLCILAITMDRYILFRNPLSLRKQSLKSAYITVAL IWILSILVATLPFSWRQNEDDNFYGRSSVCISLPLTKRTLTFKGWEYSFAVFIGLNLFIYLGVVIGQIVIYKQILAYNTC VKSDKKKQREIAVAKSLSAVVISDTLCWLPIAIIGCMAIGGVDISNDVYAWIIVFVLPLNSAINPFLYTLTSYRKQQIIH CDVPPYKQNITEPKEISLELTFIKERRISSQVSLYYIPEECHEGRKLPSCLRKLSV |
|