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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_150.1_00332
Locus scaffold150.1 : 430985 ... 449460 : +
To GenomeBrowser scaffold150.1:430985..449460
Genes list of scaffold scaffold150.1
Synonym pfu_aug1.0_24429.1_19003

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_150.1_00332.t1 gi|156405230|ref|XP_001640635.1| predicted protein [Nematostella vectensis] 4.0e-16
pfu_aug2.0_150.1_00332.t1 gi|390346880|ref|XP_003726649.1| 2.0e-15
pfu_aug2.0_150.1_00332.t1 gi|632972566|ref|XP_007902721.1| PREDICTED: usherin [Callorhinchus milii] 5.0e-14
pfu_aug2.0_150.1_00332.t1 gi|704242974|ref|XP_010145415.1| PREDICTED: LOW QUALITY PROTEIN: usherin-like [Eurypyga helias] 2.0e-13
pfu_aug2.0_150.1_00332.t1 gi|156377966|ref|XP_001630916.1| predicted protein [Nematostella vectensis] 2.0e-13

Transcript
Transcript IDpfu_aug2.0_150.1_00332.t1
Definition-
>pfu_aug2.0_150.1_00332.t1
atggggaccaattgtgccccactccttgtcgacattttcctttactcgtacgaagctgaattcattcaatctttggtctc
tcgaggtttggtattattagtttcatcatcggagggatatgtaatatataatacagataatcagatatgctgtaatatga
ggctgtataaccgtacacagtttgattttgcagtagaatgctgtaaagacagacacagatgctgtggaggtcattcatat
gacatcttcaaccagatatgttgttctggagaggttcatcagtcccattatggacgtaaacaatgttgtggatcggatgt
ctttgatcctataaaacaaatctgtagcgataagaaaatcttgccacatggaaagaggatttgcaacgatgaaatcaatg
gagacgcatttcagatttgttgcaatggacaaatacacaacagaagaggttttggagagcgtgcactttgttgtgataaa
gaacagtttgaccccagcagccaaatatgttgtgacggaaaagtacacagtacagatgatgctagtagaacacattgctg
tgggacggaagtgataaattcgtcagtgtttcactgttgcagcggaacaaaatacgatcataatatgtttcaatgttgtg
gaggtgaactttttgtcaaatcattgaagtgttgtggcgggaaaatcatcgatacgaatactcaagtatgctgtccccaa
atatttgaaatgccagaacaagtagtagagaagtccgcagaaaaccactctgaatgttgtccgtctgtaggtgggggaca
tagctatactctaaaacagactcgtattgctcataccaaggtgctgttgttcctaatgatagatcatcctatatatgtgg
taacacgaagtatgatgtcaagaaacacttgtgttgtaattacgttgttgtacagaacgctagaagcaaaggactgcgct
gttgtcatcctggtaaaagagtgtataatccaagaaaacaagtgtgctgtgattcagtacctgtcaatggaaaaagttta
tgtgattcactcgaaatcaagacgaccgtcccgattctggagtgcagaagcattacttgtcagagctggacagagaacat
tcagaaagagtgcctcaaaatttatcctaccaaaacggtagggatatgtggtatatgatacagatgaacagatatgctgt
aatatgaggctgtataaccgtacacagtttgattttgcagtagagtgctgtaaag

Protein
Protein IDpfu_aug2.0_150.1_00332.t1
Definition-
>pfu_aug2.0_150.1_00332.t1
MGTNCAPLLVDIFLYSYEAEFIQSLVSRGLVLLVSSSEGYVIYNTDNQICCNMRLYNRTQFDFAVECCKDRHRCCGGHSY
DIFNQICCSGEVHQSHYGRKQCCGSDVFDPIKQICSDKKILPHGKRICNDEINGDAFQICCNGQIHNRRGFGERALCCDK
EQFDPSSQICCDGKVHSTDDASRTHCCGTEVINSSVFHCCSGTKYDHNMFQCCGGELFVKSLKCCGGKIIDTNTQVCCPQ
IFEMPEQVVEKSAENHSECCPSVGGGHSYTLKQTRIAHTKVLLFLMIDHPIYVVTRSMMSRNTCVVITLLYRTLEAKDCA
VVILVKECIIQENKCAVIQYLSMEKVYVIHSKSRRPSRFWSAEALLVRAGQRTFRKSASKFILPKRXGYVVYDTDEQICC
NMRLYNRTQFDFAVECCK

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