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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_150.1_00335
Locus scaffold150.1 : 459756 ... 460664 : -
To GenomeBrowser scaffold150.1:459756..460664
Genes list of scaffold scaffold150.1
Synonym pfu_aug1.0_26.1_00081

Manual annotation
Annotation by Blast2GO
Annotation GO
atp-dependent dna helicase pif1 GO:0009987

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_150.1_00335.t1 gi|645012589|ref|XP_008207872.1| PREDICTED: ATP-dependent DNA helicase PIF1 [Nasonia vitripennis] 2.0e-23
pfu_aug2.0_150.1_00335.t1 gi|403182460|gb|EJY57402.1| 1.0e-21
pfu_aug2.0_150.1_00335.t1 gi|755934086|ref|XP_011314859.1| PREDICTED: ATP-dependent DNA helicase PIF1 [Fopius arisanus] 2.0e-21
pfu_aug2.0_150.1_00335.t1 gi|512929147|ref|XP_004931752.1| 9.0e-21
pfu_aug2.0_150.1_00335.t1 gi|512929143|ref|XP_004931751.1| PREDICTED: ATP-dependent DNA helicase PIF1 [Bombyx mori] 2.0e-20

Transcript
Transcript IDpfu_aug2.0_150.1_00335.t1
Definition-
>pfu_aug2.0_150.1_00335.t1
atgaacagacccctaccaccaggacctgatccaattagattgtgtgcaagaaaattcgaatgtgatgtttacaatgcatc
aaaacttcttgacatggatggggaggggaagtcatattcaactaaggacagtggtgaaaaaaagtttctgcagtctatac
ctgttccagagattttgtacctaaaagtcaacagtccgttgacattacttaaaaatcttagtgaaaaattggtgaatggg
ttacagggcaaaataacaaaactctgtaaagatagtgtattcgtatattttgatcgcatagcttctgaagtagaactcag
agcagaaactttctctgtgtattgtaccttaaaggaaaaagtgatagcatcaaggattcaattaccagtcagtttggcat
tcagtattacaatacataaagcacaagggcttactttagagcgcattgaagttgatgccagcaacatattcagtcccgga
caactgggtgtagctgttggtagaacaacagccaagaagcatcttaggatacagaactttcatccttcagctgtaataaa
gcaacaagattgtatttttgacttttataggaattcagagtgtttattagaagaagagtatgagaatagtcagacctgtt
gcaaatctaacatttttgtgaatatggatcagaatgcagagattgattttggtgaaaattatcaatatcctgattcagag
tga

Protein
Protein IDpfu_aug2.0_150.1_00335.t1
Definition-
>pfu_aug2.0_150.1_00335.t1
MNRPLPPGPDPIRLCARKFECDVYNASKLLDMDGEGKSYSTKDSGEKKFLQSIPVPEILYLKVNSPLTLLKNLSEKLVNG
LQGKITKLCKDSVFVYFDRIASEVELRAETFSVYCTLKEKVIASRIQLPVSLAFSITIHKAQGLTLERIEVDASNIFSPG
QLGVAVGRTTAKKHLRIQNFHPSAVIKQQDCIFDFYRNSECLLEEEYENSQTCCKSNIFVNMDQNAEIDFGENYQYPDSE

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