Gene
| Gene Model ID | pfu_aug2.0_1502.1_08408 |
|---|---|
| Locus | scaffold1502.1 : 131846 ... 154087 : + |
| To GenomeBrowser | scaffold1502.1:131846..154087 |
| Genes list of scaffold | scaffold1502.1 |
| Synonym | pfu_aug1.0_6384.1_67429 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1502.1_08408.t1 | 2 | 1 | Lectin_C | 39 | 108 | 1.1e-15 | 58.1 | 1.1e-11 | 1.6e-07 | 31.9 |
| pfu_aug2.0_1502.1_08408.t1 | 2 | 2 | Lectin_C | 143 | 201 | 1.1e-15 | 58.1 | 2.6e-11 | 3.9e-07 | 30.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1502.1_08408.t1 | gi|548551774|ref|XP_005755261.1| | PREDICTED: C-type mannose receptor 2-like [Pundamilia nyererei] | 6.0e-14 |
| pfu_aug2.0_1502.1_08408.t1 | gi|542261285|ref|XP_005465613.1| | PREDICTED: C-type mannose receptor 2-like isoform X3 [Oreochromis niloticus] | 7.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_1502.1_08408.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1502.1_08408.t1 atggttcaggtgcccctcgtatgtggcttggaggtactgatgccgcacaagaaggtcaatggatatgggaccattcaaac acatagatatcattcgataattggtctgaaggttcgccaagcgggtgcccctcgtatgtggcttggaggtactgatgccg cacaagaaggtcaatggatatgggaccattcaaacacatcgatatcattcgataattggtctgaaggttcgccaagcgga tatgacgagaactgtatggtgtccatgtactctgaatggcaagactatcattgcttatcacatttcaagttcatttgcga aaagaagctcaataatcgtttgacgtcatcagatatcgagtacggaaagagatgtgatgacacgtggtatttctttagag ggcattgcttcaaacgattcggggcatctcgaacttggaatgaatcaaaggaattttgcattaaagaaggaagctggatt gctgaagtaaaagatgatgaaaccgtcgacttcctgcgtaaaagaagtggctcttacaattggctcggtggctctgattt tgatgacgacggcaaatggacttgggaccattcgaacactctgatcacgtatgatggttggtacgggtcacaaccttata ttgg |
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Protein
| Protein ID | pfu_aug2.0_1502.1_08408.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1502.1_08408.t1 MVQVPLVCGLEVLMPHKKVNGYGTIQTHRYHSIIGLKVRQAGAPRMWLGGTDAAQEGQWIWDHSNTSISFDNWSEGSPSG YDENCMVSMYSEWQDYHCLSHFKFICEKKLNNRLTSSDIEYGKRCDDTWYFFRGHCFKRFGASRTWNESKEFCIKEGSWI AEVKDDETVDFLRKRSGSYNWLGGSDFDDDGKWTWDHSNTLITYDGWYGSQPYI |
|