Gene
| Gene Model ID | pfu_aug2.0_1506.1_21655 |
|---|---|
| Locus | scaffold1506.1 : 76269 ... 98965 : - |
| To GenomeBrowser | scaffold1506.1:76269..98965 |
| Genes list of scaffold | scaffold1506.1 |
| Synonym | pfu_aug1.0_41089.1_12438 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cre-ost-1 protein | GO:0000003 GO:0002119 GO:0005604 GO:0009792 GO:0040018 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1506.1_21655.t1 | 2 | 1 | SPARC_Ca_bdg | 107 | 133 | 1.1e-27 | 96.3 | 3.1 | 7700.0 | -3.1 |
| pfu_aug2.0_1506.1_21655.t1 | 2 | 2 | SPARC_Ca_bdg | 137 | 247 | 1.1e-27 | 96.3 | 4.4e-31 | 1.1e-27 | 96.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1506.1_21655.t1 | gi|676428569|ref|XP_009045318.1| | hypothetical protein LOTGIDRAFT_109908, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1506.1_21655.t1 | gi|17541696|ref|NP_500039.1| | OST-1, isoform a [Caenorhabditis elegans] | 0.0 |
| pfu_aug2.0_1506.1_21655.t1 | gi|308461581|ref|XP_003093081.1| | CRE-OST-1 protein [Caenorhabditis remanei] | 0.0 |
| pfu_aug2.0_1506.1_21655.t1 | gi|268553923|ref|XP_002634949.1| | C. briggsae CBR-OST-1 protein [Caenorhabditis briggsae] | 0.0 |
| pfu_aug2.0_1506.1_21655.t1 | gi|170586030|ref|XP_001897784.1| | SPARC precursor [Brugia malayi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1506.1_21655.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1506.1_21655.t1 atgaagtggatactggctctgttcttactcggcctggtctggtcagctttagcacagtatgatctgacagatgtcgatga agagggagatgatgacgtcgatgataacgtacaacctgtagatgacaacaaccaagggaacaggaaaaatccctgcaact tcaaagaatgtaagaggagaggacagacttgtatcctgacaccaaataacaaagcaaagtgtgtatgtcgggaggaatgt aagatagatcccgaccccaggcatatggtgtgcagtgttaagaatatgacatttgacagtgagtgtcatcttgacagaga atactgcatgtgtaaaagcatgaaggcctgtagtaatgcagaagccaagaaattccgccttgactattacggtgaatgta aagagctgacacggtgtgaggacttggagatgaagcagttcccagacagaatgagtaactggacatatgttgtcatgaag gaaatggcccgtcgtcatcaactggatacagaataccttgacctcctaaagaaggcaacagccgacgatcatcacactga tgccatcctctggaaattctgtgaccttgacatcagaccccacgacagaaaagtgagcagacgtgaattattgttcatca ttgcctcagtgaagcccatggagcactgcctggtacctttccttacacaatgtgatgaagacaacgatggtctcatctct cttgtagaatggggcaaatgtcttaaccttgacccagttcatattgaggacaagtgtaaagacatccaaagtaggcgaca gtaa |
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Protein
| Protein ID | pfu_aug2.0_1506.1_21655.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1506.1_21655.t1 MKWILALFLLGLVWSALAQYDLTDVDEEGDDDVDDNVQPVDDNNQGNRKNPCNFKECKRRGQTCILTPNNKAKCVCREEC KIDPDPRHMVCSVKNMTFDSECHLDREYCMCKSMKACSNAEAKKFRLDYYGECKELTRCEDLEMKQFPDRMSNWTYVVMK EMARRHQLDTEYLDLLKKATADDHHTDAILWKFCDLDIRPHDRKVSRRELLFIIASVKPMEHCLVPFLTQCDEDNDGLIS LVEWGKCLNLDPVHIEDKCKDIQSRRQ |
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