Gene
| Gene Model ID | pfu_aug2.0_15072.1_09884 |
|---|---|
| Locus | scaffold15072.1 : 184 ... 1446 : + |
| To GenomeBrowser | scaffold15072.1:184..1446 |
| Genes list of scaffold | scaffold15072.1 |
| Synonym | pfu_aug1.0_10149.1_17585 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15072.1_09884.t1 | 1 | 1 | Lactamase_B | 27 | 161 | 5.4e-15 | 55.5 | 1.0e-17 | 5.2e-14 | 52.3 |
| pfu_aug2.0_15072.1_09884.t1 | 1 | 1 | Lactamase_B_2 | 37 | 150 | 1.6e-07 | 31.0 | 4.2e-11 | 2.1e-07 | 30.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15072.1_09884.t1 | gi|524894726|ref|XP_005103855.1| | PREDICTED: metallo-beta-lactamase domain-containing protein 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_15072.1_09884.t1 | gi|676496328|ref|XP_009067183.1| | hypothetical protein LOTGIDRAFT_237140 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_15072.1_09884.t1 | gi|260815481|ref|XP_002602501.1| | hypothetical protein BRAFLDRAFT_227287 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_15072.1_09884.t1 | gi|557022180|ref|XP_006011355.1| | PREDICTED: metallo-beta-lactamase domain-containing protein 1-like [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_15072.1_09884.t1 | gi|260829233|ref|XP_002609566.1| | hypothetical protein BRAFLDRAFT_241400 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_15072.1_09884.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15072.1_09884.t1 atgtacgaagttatagtacttagagatgggtatagcagggatgatgaaggcgaaggaatatacagtatgagagctgcttg taccatcacattggtcaagggaccaaagaacattattgtagatccaggtagtccatgggaaaaacaatttgttattgaca gtctgaaaaagcatggtctcgattgtgatcaaataaactatgttgtgtgtacgcatggacactcagatcatatcggtaac ctgaacttgtttaccaatgctgtacatatagtatcttacgatatttgttttggagatcagtatgtgtcccactcctttca gcatggaataccctacgagatagatgaaggcagagtagaagtagttcccacaccaggccataccggatccgatgtcaccg tcctggtcagggacaccaaacaaggaactgttgccatcgctggagatttatttgagcgggaagaagaccttgataaccca catctatggcaaaataatagtgaaaatgaagaagtacagcagcaaagtcgtataaatatcctacaaattgcagacatgat cattcctggccatggtgctatgtttaaggttacccaggaaagcaagtcatcattgcgtgttgtaatgttttatgaacaaa aatttgaaagtgtatcaccgagtcattatgaggctagttcttcagaatatgttataattgaagaggattaa |
|
Protein
| Protein ID | pfu_aug2.0_15072.1_09884.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15072.1_09884.t1 MYEVIVLRDGYSRDDEGEGIYSMRAACTITLVKGPKNIIVDPGSPWEKQFVIDSLKKHGLDCDQINYVVCTHGHSDHIGN LNLFTNAVHIVSYDICFGDQYVSHSFQHGIPYEIDEGRVEVVPTPGHTGSDVTVLVRDTKQGTVAIAGDLFEREEDLDNP HLWQNNSENEEVQQQSRINILQIADMIIPGHGAMFKVTQESKSSLRVVMFYEQKFESVSPSHYEASSSEYVIIEED |
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