Gene
| Gene Model ID | pfu_aug2.0_151.1_03714 |
|---|---|
| Locus | scaffold151.1 : 356127 ... 431850 : + |
| To GenomeBrowser | scaffold151.1:356127..431850 |
| Genes list of scaffold | scaffold151.1 |
| Synonym | pfu_aug1.0_9.1_43393 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| triple functional domain protein | GO:0004674 GO:0005089 GO:0005515 GO:0005829 GO:0007185 GO:0007411 GO:0043065 GO:0043547 GO:0048011 GO:0097190 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_151.1_03714.t1 | 2 | 1 | CRAL_TRIO_2 | 44 | 187 | 5.0e-15 | 55.6 | 1.6e-17 | 3.4e-14 | 52.9 |
| pfu_aug2.0_151.1_03714.t1 | 9 | 1 | Spectrin | 151 | 199 | 3.20001e-41 | 139.8 | 0.00033 | 0.71 | 10.1 |
| pfu_aug2.0_151.1_03714.t1 | 9 | 2 | Spectrin | 258 | 337 | 3.20001e-41 | 139.8 | 2.8e-09 | 5.9e-06 | 26.5 |
| pfu_aug2.0_151.1_03714.t1 | 9 | 3 | Spectrin | 341 | 387 | 3.20001e-41 | 139.8 | 0.13 | 280.0 | 1.8 |
| pfu_aug2.0_151.1_03714.t1 | 9 | 4 | Spectrin | 460 | 563 | 3.20001e-41 | 139.8 | 1.3e-11 | 2.8e-08 | 33.9 |
| pfu_aug2.0_151.1_03714.t1 | 4 | 1 | RhoGEF | 535 | 535 | 1.9e-35 | 122.3 | 1.4 | 2900.0 | -2.1 |
| pfu_aug2.0_151.1_03714.t1 | 9 | 5 | Spectrin | 568 | 674 | 3.20001e-41 | 139.8 | 2.2e-07 | 0.00046 | 20.4 |
| pfu_aug2.0_151.1_03714.t1 | 9 | 6 | Spectrin | 679 | 791 | 3.20001e-41 | 139.8 | 0.0029 | 6.1 | 7.1 |
| pfu_aug2.0_151.1_03714.t1 | 4 | 2 | RhoGEF | 736 | 796 | 1.9e-35 | 122.3 | 1.7 | 3700.0 | -2.4 |
| pfu_aug2.0_151.1_03714.t1 | 9 | 7 | Spectrin | 794 | 894 | 3.20001e-41 | 139.8 | 1.0e-12 | 2.2e-09 | 37.5 |
| pfu_aug2.0_151.1_03714.t1 | 4 | 3 | RhoGEF | 970 | 970 | 1.9e-35 | 122.3 | 7.0 | 15000.0 | -6.5 |
| pfu_aug2.0_151.1_03714.t1 | 9 | 8 | Spectrin | 1023 | 1127 | 3.20001e-41 | 139.8 | 2.6e-11 | 5.6e-08 | 33.0 |
| pfu_aug2.0_151.1_03714.t1 | 4 | 4 | RhoGEF | 1176 | 1346 | 1.9e-35 | 122.3 | 9.0e-39 | 1.9e-35 | 122.3 |
| pfu_aug2.0_151.1_03714.t1 | 2 | 2 | CRAL_TRIO_2 | 1383 | 1401 | 5.0e-15 | 55.6 | 3.6 | 7700.0 | -3.4 |
| pfu_aug2.0_151.1_03714.t1 | 9 | 9 | Spectrin | 1454 | 1480 | 3.20001e-41 | 139.8 | 0.6 | 1300.0 | -0.3 |
| pfu_aug2.0_151.1_03714.t1 | 2 | 1 | SH3_2 | 1557 | 1615 | 5.3e-11 | 41.8 | 2.0e-07 | 0.00043 | 19.7 |
| pfu_aug2.0_151.1_03714.t1 | 2 | 1 | SH3_1 | 1558 | 1610 | 7.9e-07 | 28.3 | 2.7e-05 | 0.057 | 12.8 |
| pfu_aug2.0_151.1_03714.t1 | 2 | 2 | SH3_2 | 1648 | 1706 | 5.3e-11 | 41.8 | 2.0e-07 | 0.00043 | 19.7 |
| pfu_aug2.0_151.1_03714.t1 | 2 | 2 | SH3_1 | 1649 | 1701 | 7.9e-07 | 28.3 | 2.7e-05 | 0.057 | 12.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_151.1_03714.t1 | gi|524897568|ref|XP_005105244.1| | PREDICTED: triple functional domain protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_151.1_03714.t1 | gi|676483563|ref|XP_009063066.1| | hypothetical protein LOTGIDRAFT_220800 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_151.1_03714.t1 | gi|119628449|gb|EAX08044.1| | triple functional domain (PTPRF interacting), isoform CRA_a [Homo sapiens] | 0.0 |
| pfu_aug2.0_151.1_03714.t1 | gi|45439359|ref|NP_009049.2| | triple functional domain protein [Homo sapiens] | 0.0 |
| pfu_aug2.0_151.1_03714.t1 | gi|557291487|ref|XP_006028306.1| | PREDICTED: triple functional domain protein [Alligator sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_151.1_03714.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_151.1_03714.t1 atgagttctcaggagcacggacatgaatcttccaatgaccgagatgttgaatttttcaacagatcaggaggtaagcggac agatgggttgaaagcagcagacattgtcccgatcctgagggagaggatagcttacctctcaggtgggcgggacaaaagag ggggaccgatccttacttttccctcgttgacacacccagagagattggacaatgaagagctaaggcggctcatgacttac ttagctagtgttcccagtgatgaagtgagggatagaggctttactgtgatattagatatgcgagggtccacctggcaaat cgtcaaacctatacttaaagtattacaggactgttttcctggcaatatatacatagcttacataatcaaaccggaaaaat tctgggagaagaaaagaactagtctgggcagtgccaagtataattttgagatgctggaggagtttatctgcaaggcttta gatttacttgacaagttagatgatctcggggaaatcctcacgaatcccgaattaccggaagatctcaacggtgctcaata caagctggaagaacataaccatctcaaacgacgtgtacagatggcgccggtggagcatctcggcatggaagggcaccgca tactacaggaaattactggagagggacaccaatcaggtgtgatgttgaacatttggggatcacctaatattgttcacaag aatatgaaaatgtttgattggataggacataaccgtgatttatttctagtcaattatacggagattggaaactctcacca gatggcagtagagttagagtctgagcatgctcagttcgccaatagtgctgtgaatgtttatgtaaatataacaagaatca ttgcaatggctcagcgactgtgtgatgctggacattacgcgtccaatacgataaggatgcaggcaggacagcttgagaga gaatggaaaagtctggctgcagcagttgaggatcgtagtgtcgtgctagaaatgtctgtcaacttctacaaaaaggctga acagtacttggcccaggttgttggatggagacaggcttgcgaggattctcacattccctcggaaatcgagaatctagagg gcgctttacagcagcatcaaagtctcattgaagccatcacacatgcttatgctgaggtgtgtagtgatgggaaaacacta cttgatactcttcagacaccggtgacatctagtagtgtcaacagtattacagccaaggcagactactctgaagcatcagg acatgtactggatgtcgtacatgatgtcctagctcatcagagacatcttgaacagatgtggcagtccaaaaaggtcaaac tgtctcagaggctcggcctccgtctattccaacaggacgttaaacaggtgttagactggctggataaccatggtgatatc ttcttaaggaaaaatacatcaataggaaggagtttacaaagaagcaaggctctacagaaaagtcatgaacattttgaaac agttgccaagaacactattaccaatgccgataagttattggctgcagcagacgagctagcgcagacaggcgagtgtgatc ctaacgagatttatcgagaggcccaggagctacagagcagaatgagtaacttccttacatcgttaaatcggagaaaagac acattggaaatggctgtattcttctatacacatgtacatgagctaacaacatggcttgaggagttacaacaggaactaca gagctcagagattgccgacacggtggagggggcagagcaattactggaacagttcaatcaacagcgacaggcaaccaatg aggcgtgcataaacactgttagtgagggagaaaacatactagaggaactcagggtattcagtgcagaaccggacaagatc aatcaaaatgcggattacacccatatagaaggtgtgttacgtcaattaaatgacagtcgttcacaactggaggaattatg gggagccaggaagataaagttggacctctgtctacagctcagattgtttgaaagagatgctctggaggtttcatcacagc tagagttgtgggcagaggaattgcagcatcaagaacttgtatctgatggaagtaaagcggaccaacaattacaaatacat aatgaaagtgtgttacacatgcaaaactgcacatatgaggttttacaaagaggacaggagctcatacagatatttgagac gtctggggttcagctcatggcagacacacagtgtaacgctcaggggcggatccaggcattacttgagtacctacatgagc gtgagatggacctggagacgatggccgagacaaaaagacagagactcgaacaatgtgtgcagctcaggaactttgaaata gaggctcggcaggtgatatattggatagatcacggcaagtctatgttgatcagctgttttatgtgtcctaactcgttaat ggaagcagaacaactgaggaaggagcacgagcagttcatgatggcaatagagaaaaccaacatatcaatggcacaagtaa ctaacagagctgaatccatgatacagagtagccactataactctgacctggtgagggcaatcgcagaaaacgtaacgttc gcatggcaacagctgatgtatcatacggaagaacggcacaaactcgttatggcttccatgaactggtacaagacggcaga acaggtatggtcagtgctggagagtttggacagagattataaacgtgaggaagactggtgtagcacagaacgtgtcgtac cgagcgagaaggcaaactacctactacagcttataaacaaacataacgaacagaaggaggctttcctcaaggcttgcact cttgctagaagaacagctgaaacgttcctgaagtatgtcagtaggaatctccatacgtttggttcacagctcaagttcag aagtcccgaaaagcacgtcaaagcaacccttgaccaattactgcagcaggagaacattgttatagaatattggacggtca aaaagaagaagctggaacaatgtcatcaatatgtattatttgaacagagtgctaagcaggctatagattggatcagagat tacggtgagaaatatctacagacccataaagatgtcggttccaacgcacaagaaacagaaaacttgttaaaggaatacta tgaattcaggagcagagccaaggaaacaaaagaaagtgtcaaactcctcctgtcattggccgatggcttcgttgctaagg gtaacatacatgctagtagtattatgcagtggtgtggagccgtggacaaacgctataaagatttttcctcacggatggaa aagtatcgtcacaagctagagtctacactaggtgtcaaaggagaggagcctaaagaagaggagaagcagcgtcacagtga ctcgtccatcgaggagaaagtcctccatcaaactcctaaagaactcacggaggagaaacgcagatctgctaggaggaggg aatttatcatggcagaattattacagacagagagaacatatgttaaggacttggatgtgtgtttaaagtgttatttaaac ggcatgaaagatacgaggaacgatgtgcctcaaggaattgtgggaaaacataaagttatttttagcaacattgaggaaat atatgaattccataacagtgttttcttgaaggagctagagaaatatgagactatacctgaagatgtgggccattgctttg ttacatgggcacagaagttttctatatatgtaacatactgtaaaaataaacctgactcaaatcaactgctagtggagcat gctggaggattctttgaggaactacaaggaagacataagttgaacgaaccgttagcttcctacctaatcaaaccggtaca gcgtatcaccaagtatcaactactgctgaaagatctgttatcctgctgcgagggtcacataggggaaattaaggatggtt tagaggtaatgatgagcgtaccgaagaaggctaacgatgccatgcacctctcgctgctcgaaggtctcgaggagaaagtt gaggccctcggtgatgttttcctccaggaccagtttaccgtatgggatccaaaacagctgattaaaaaggggcgtgatcg gcatctcttcctgtttgatatgtgtctcattttttcgaaggaggtgaaagatagtaacggaaaagcaaagtatcagtaca agttcagacttatgatttctgacgtaaacatcacagaacatatagagggagatgagacaaagtttgctctatggacagga agggctcctatctctgactatagaattattctgaagtccaaagacctagagaccaaacagaactgggtgaagaagttacg agaattgatgcaggagagaatgcagtatatgcatgaggcactgaaggacaaacaacctcagctgttcaaacctccaccta aatctttccatccgaccagacaagctccaatgggtctgattaaaagagagccaggtggtgaccttgactctgatgacctt cccattgagagaagacgagggtccttcacctctatgatctccttggcaaccacggtaactaccgacagcagtagtagcgg aggagaaaaggacaggggtgacgtcacagtggtcatagaggattactctgcggcaaacaactcagaactgactgtcatca aaggccagcaggtggagttactagatacagcgccccctggtgagcagaattggtgtctggttcgtatgatcaatgcagag gacggagaacctacccaggggctcgtacctatatcctcccttaaaatgatacctgccctacagagagcgaccaatagaaa cagtatggacctagaagacctattatggttcaattttggtcttttccagggtgacgtcacagtggtcatagaggattact ctgcggcaaacaactcagaactgactgtcatcaaaggccagcaggtggagttactagatacagcgccccctggtgagcag aattggtgtctggttcgtatgatcaatgcagaggacggagaacctacccaggggctcgtacctatatcctcccttaaaat gatacctgccctacagagagcgaccaatagaaacagtatggacctagaagagacaatgggtttaccaaaggaacgcagcg cttcaccggtatccaaaaggaaaactagtttcaagtga |
|
Protein
| Protein ID | pfu_aug2.0_151.1_03714.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_151.1_03714.t1 MSSQEHGHESSNDRDVEFFNRSGGKRTDGLKAADIVPILRERIAYLSGGRDKRGGPILTFPSLTHPERLDNEELRRLMTY LASVPSDEVRDRGFTVILDMRGSTWQIVKPILKVLQDCFPGNIYIAYIIKPEKFWEKKRTSLGSAKYNFEMLEEFICKAL DLLDKLDDLGEILTNPELPEDLNGAQYKLEEHNHLKRRVQMAPVEHLGMEGHRILQEITGEGHQSGVMLNIWGSPNIVHK NMKMFDWIGHNRDLFLVNYTEIGNSHQMAVELESEHAQFANSAVNVYVNITRIIAMAQRLCDAGHYASNTIRMQAGQLER EWKSLAAAVEDRSVVLEMSVNFYKKAEQYLAQVVGWRQACEDSHIPSEIENLEGALQQHQSLIEAITHAYAEVCSDGKTL LDTLQTPVTSSSVNSITAKADYSEASGHVLDVVHDVLAHQRHLEQMWQSKKVKLSQRLGLRLFQQDVKQVLDWLDNHGDI FLRKNTSIGRSLQRSKALQKSHEHFETVAKNTITNADKLLAAADELAQTGECDPNEIYREAQELQSRMSNFLTSLNRRKD TLEMAVFFYTHVHELTTWLEELQQELQSSEIADTVEGAEQLLEQFNQQRQATNEACINTVSEGENILEELRVFSAEPDKI NQNADYTHIEGVLRQLNDSRSQLEELWGARKIKLDLCLQLRLFERDALEVSSQLELWAEELQHQELVSDGSKADQQLQIH NESVLHMQNCTYEVLQRGQELIQIFETSGVQLMADTQCNAQGRIQALLEYLHEREMDLETMAETKRQRLEQCVQLRNFEI EARQVIYWIDHGKSMLISCFMCPNSLMEAEQLRKEHEQFMMAIEKTNISMAQVTNRAESMIQSSHYNSDLVRAIAENVTF AWQQLMYHTEERHKLVMASMNWYKTAEQVWSVLESLDRDYKREEDWCSTERVVPSEKANYLLQLINKHNEQKEAFLKACT LARRTAETFLKYVSRNLHTFGSQLKFRSPEKHVKATLDQLLQQENIVIEYWTVKKKKLEQCHQYVLFEQSAKQAIDWIRD YGEKYLQTHKDVGSNAQETENLLKEYYEFRSRAKETKESVKLLLSLADGFVAKGNIHASSIMQWCGAVDKRYKDFSSRME KYRHKLESTLGVKGEEPKEEEKQRHSDSSIEEKVLHQTPKELTEEKRRSARRREFIMAELLQTERTYVKDLDVCLKCYLN GMKDTRNDVPQGIVGKHKVIFSNIEEIYEFHNSVFLKELEKYETIPEDVGHCFVTWAQKFSIYVTYCKNKPDSNQLLVEH AGGFFEELQGRHKLNEPLASYLIKPVQRITKYQLLLKDLLSCCEGHIGEIKDGLEVMMSVPKKANDAMHLSLLEGLEEKV EALGDVFLQDQFTVWDPKQLIKKGRDRHLFLFDMCLIFSKEVKDSNGKAKYQYKFRLMISDVNITEHIEGDETKFALWTG RAPISDYRIILKSKDLETKQNWVKKLRELMQERMQYMHEALKDKQPQLFKPPPKSFHPTRQAPMGLIKREPGGDLDSDDL PIERRRGSFTSMISLATTVTTDSSSSGGEKDRGDVTVVIEDYSAANNSELTVIKGQQVELLDTAPPGEQNWCLVRMINAE DGEPTQGLVPISSLKMIPALQRATNRNSMDLEDLLWFNFGLFQGDVTVVIEDYSAANNSELTVIKGQQVELLDTAPPGEQ NWCLVRMINAEDGEPTQGLVPISSLKMIPALQRATNRNSMDLEETMGLPKERSASPVSKRKTSFK |
|