Gene
| Gene Model ID | pfu_aug2.0_151.1_03715 |
|---|---|
| Locus | scaffold151.1 : 438867 ... 465961 : + |
| To GenomeBrowser | scaffold151.1:438867..465961 |
| Genes list of scaffold | scaffold151.1 |
| Synonym | pfu_aug1.0_9.1_43393 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| triple functional domain | GO:0004672 GO:0005085 GO:0005515 GO:0005737 GO:0006915 GO:0007167 GO:0008152 GO:0035023 GO:0042221 GO:0048518 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_151.1_03715.t1 | 1 | 1 | RhoGEF | 153 | 207 | 5.1e-12 | 46.0 | 4.9e-16 | 7.3e-12 | 45.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_151.1_03715.t1 | gi|585198849|ref|XP_006750434.1| | PREDICTED: triple functional domain protein-like [Leptonychotes weddellii] | 7.0e-31 |
| pfu_aug2.0_151.1_03715.t1 | gi|694659391|ref|XP_009485148.1| | PREDICTED: rho guanine nucleotide exchange factor 25, partial [Pelecanus crispus] | 1.0e-30 |
| pfu_aug2.0_151.1_03715.t1 | gi|507537137|ref|XP_004652596.1| | PREDICTED: triple functional domain protein [Jaculus jaculus] | 5.0e-30 |
| pfu_aug2.0_151.1_03715.t1 | gi|505790383|ref|XP_004605675.1| | PREDICTED: triple functional domain protein [Sorex araneus] | 6.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_151.1_03715.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_151.1_03715.t1 atgggaaaacacagaaaagttaaaggcaagctgtccgtgttctgcgggtgcatggtacgacagacagaggacgtccagga tgacgtcaaaccgctccccaaatttgtggagccaagtgaccagccggtgaagtcgcccgtggaccaagccgacgacgagg cccctgacatcaccatgcccccacccatggagatacagactcattttaccacaccccctgatggatcccccgaactgccg tcttcactaggactaaagacgccgactacagaccctgttacgggaatagatctagagtctgaaatcgacaaactcgtgca gaaacgctcagatatgaacagcgacaacagatctgacgggggccaagcgtcatctgaatctgggggagaaaacaacgagg ccgaagcagacgacggagagaaagaaaaagaaaaatatatacagaaaagaagatttgtgctacaagagttaatcaacaca gagaaagactatgttaaagatttaggattggttgtagagggttatatggagatgatgaaagaaaatcccatgccgcccgg taatgaaggaaaagataagatagtattcggcaatattcaccagatatacgactggcatagaga |
|
Protein
| Protein ID | pfu_aug2.0_151.1_03715.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_151.1_03715.t1 MGKHRKVKGKLSVFCGCMVRQTEDVQDDVKPLPKFVEPSDQPVKSPVDQADDEAPDITMPPPMEIQTHFTTPPDGSPELP SSLGLKTPTTDPVTGIDLESEIDKLVQKRSDMNSDNRSDGGQASSESGGENNEAEADDGEKEKEKYIQKRRFVLQELINT EKDYVKDLGLVVEGYMEMMKENPMPPGNEGKDKIVFGNIHQIYDWHR |
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