Gene
| Gene Model ID | pfu_aug2.0_1522.1_08423 |
|---|---|
| Locus | scaffold1522.1 : 121581 ... 139245 : - |
| To GenomeBrowser | scaffold1522.1:121581..139245 |
| Genes list of scaffold | scaffold1522.1 |
| Synonym | pfu_aug1.0_49892.1_27241 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1522.1_08423.t1 | 3 | 1 | CHORD | 5 | 67 | 1.6e-36 | 124.3 | 3.0e-31 | 1.1e-27 | 96.0 |
| pfu_aug2.0_1522.1_08423.t1 | 3 | 2 | CHORD | 83 | 112 | 1.6e-36 | 124.3 | 4.1e-12 | 1.5e-08 | 34.7 |
| pfu_aug2.0_1522.1_08423.t1 | 3 | 3 | CHORD | 123 | 133 | 1.6e-36 | 124.3 | 1.5 | 5600.0 | -2.4 |
| pfu_aug2.0_1522.1_08423.t1 | 1 | 1 | CS | 126 | 203 | 2.4e-10 | 40.8 | 9.9e-14 | 3.7e-10 | 40.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1522.1_08423.t1 | gi|524865504|ref|XP_005089581.1| | PREDICTED: cysteine and histidine-rich domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1522.1_08423.t1 | gi|260789534|ref|XP_002589801.1| | hypothetical protein BRAFLDRAFT_125901 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1522.1_08423.t1 | gi|676490806|ref|XP_009065390.1| | hypothetical protein LOTGIDRAFT_155607 [Lottia gigantea] | 2.99878e-43 |
| pfu_aug2.0_1522.1_08423.t1 | gi|675879238|ref|XP_009025176.1| | hypothetical protein HELRODRAFT_68024 [Helobdella robusta] | 5.00264e-43 |
| pfu_aug2.0_1522.1_08423.t1 | gi|242024533|ref|XP_002432682.1| | Integrin beta-1-binding protein, putative [Pediculus humanus corporis] | 4.00001e-41 |
Transcript
| Transcript ID | pfu_aug2.0_1522.1_08423.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1522.1_08423.t1 atgtcaaaccttgtacattgctacaataaaggttgtggaaagaagtttgatgtagccgacaataatgacgattcctgcca gtttcatccaggtggtccagtattccatgatgccatgaaaggatggtcatgttgtaaaaaaagaagcacagatttcactg aattcctaaatttcccaggatgtacaagaggaaagcatagtaatgaaaaacctcctgaaccagaaaagaaacagaatgtg ccgctggagaaagatgagttttggtcctgttgccggaggagaacaacagagtttgatgtgttcttagaccaagaaggatg tgaaactggaaagcatctctgggtcaaacctaatgtatctggtgagaagaaatcttgtagatttgactggcatcaaacaa actcttacatgacaatatctgtgtattctaaagttactgtgccagagaagtgtacgataaaagctaatagagtcaggtgt gatatcagtattgttttcgatggaggaaatagtttgtttgaaaacaacgttattctcagagaggttatagatccagtgaa cagtcaagtaaagatgatgggtactaaagtagagataaatctacggaaggtggagtcattcagctggccgtccctggagt taccagcacaaacagacagccagcaactagacaatgataatgacactcctgattcttaa |
|
Protein
| Protein ID | pfu_aug2.0_1522.1_08423.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1522.1_08423.t1 MSNLVHCYNKGCGKKFDVADNNDDSCQFHPGGPVFHDAMKGWSCCKKRSTDFTEFLNFPGCTRGKHSNEKPPEPEKKQNV PLEKDEFWSCCRRRTTEFDVFLDQEGCETGKHLWVKPNVSGEKKSCRFDWHQTNSYMTISVYSKVTVPEKCTIKANRVRC DISIVFDGGNSLFENNVILREVIDPVNSQVKMMGTKVEINLRKVESFSWPSLELPAQTDSQQLDNDNDTPDS |
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