Gene
| Gene Model ID | pfu_aug2.0_1527.1_24971 |
|---|---|
| Locus | scaffold1527.1 : 30361 ... 47165 : - |
| To GenomeBrowser | scaffold1527.1:30361..47165 |
| Genes list of scaffold | scaffold1527.1 |
| Synonym | pfu_aug1.0_4200.1_59458 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1527.1_24971.t1 | 1 | 1 | Menin | 3 | 694 | 0.0 | 663.5 | 0.0 | 0.0 | 660.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1527.1_24971.t1 | gi|676465442|ref|XP_009057245.1| | hypothetical protein LOTGIDRAFT_121605 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1527.1_24971.t1 | gi|524911287|ref|XP_005110509.1| | PREDICTED: menin-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1527.1_24971.t1 | gi|115754767|ref|XP_794534.2| | PREDICTED: menin [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1527.1_24971.t1 | gi|260791738|ref|XP_002590885.1| | hypothetical protein BRAFLDRAFT_240022 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1527.1_24971.t1 | gi|340713103|ref|XP_003395088.1| | PREDICTED: menin [Bombus terrestris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1527.1_24971.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1527.1_24971.t1 atggcgggattccgcgatcgggaaaaacagtttttcccacttcaaaatattggagatgttgtgaagttgttcaaggatca actgatcagtgatgaagaacctaatttacccttgttgtcaattgtcttgggagttatcgaaaacatactgacagtgcaca gggcggccccaacagaagttgacagttcaaaaattttggaaccgattttccccgtcatagaattggaaacagttgaagct ttacattcaaaatttgtggctttgattaagaaatctgtggatttgacaaagtttcctcaaggttatgccaccagagaatt ggtgaaatttgtgtcggatgttatttggtgctctctgacgcgggcctattacaaggacaaggcccatctacaatcgttgt acagtttcctaacggggaataagttggactgttttggtgtggcatttgcagtagtagcggcgtttcaggtgttggaatat aaagatgtccacttggcattatcagaggaccatgcatgggtggtatttggtgaggatcaacgagagactgccgaggtcac gtggcatggtaaaggtaatgaggataagagaggacagcctatcactgagggtgtagcagataagagctggttgtacctaa acggacagccagtgatttgtactcgccagatggaggtggcttctatcgtcagcggtataaacccgtcaataactctgtcc acagatagcgtagaactagcagcactccaacaggagttgctttggttgctgcatgatatgggccacctagacaagtaccc catggcactgggaaatcttggtgatttagaggaaatctcacatactcctgagaaacctccggcagtgaggctgtttgaag aagctatagaatcgaccaagaagcattacaacaaccagcatgtgtatccttatacatatatgggaggctatcactacagg aggggcaactataaggaagccctacaagcatgggctgatgctacatctgcactcaaaaattacaactacaacagagagga tgaagaaatttacaaagaatttttggatattgcaaacaacatcatcccacacatgatgaaacaaatagaaaacgataacg ctggaagaatacatcatacgacaattctgtatgatcctgaaagctacgcaaacttcttacgattttacgacggaatatgt gagtgggaagaggacagtcctacccctgttctccatataacgggggacattaatctgaaaggagaaaatggtgaggaaga agaaagtggggaaagtgaatctgatagtgacagtgaaactgaaaataaagacaaaaatcaaaatgtgacagatcggaaag atgtgaacaaaatagaggaagacttgtcaacaaagagtagcgcgcgaggcattagggggagaaaacagggtcgtagggtc ggtggacatactaaaaggtcaaaggaggaagattcaacggaggtcaatggagattcaaaagaggaagaattaaagagtgt gatagaggaacttgaaagcaaagtagaggaaagtagtgaaaaagagcccattaatcccagtatatcagatctggctaaag cttgtggtgaaggcattttgaacccagattatctactgggtggagagggtcctttcaccacggctaacaccacaatgact gtaagtacatctacaacagactctcgtgtagattaccaggaatttttgagttctaagtcgaatggatcaccttttatggg aatgactgtagactctatgttaaaggcagagagcccgtctgacatggttatgtatagaaaacgaccaagttcaacgcgca cgcctacacctattgtagattccaattctaatgctgaactggctactgacgaaggtactgtaatccctagtcctttacca aagggtcctcctgtattactctgtctcagaagtgaaaaaatgaaaggactgaaaaagattttctcgtcaccgaagcttaa cgccaatgcaataaaattacagctgacggcacagtcgcaagtccatttcaagcataataaacgcagcactgactcagatt tagctccactgagaaaacgacatatggtgtggtgctgccggtctgatcaagtatttcccagtgttcttgtgtggaaatat aacaaatag |
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Protein
| Protein ID | pfu_aug2.0_1527.1_24971.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1527.1_24971.t1 MAGFRDREKQFFPLQNIGDVVKLFKDQLISDEEPNLPLLSIVLGVIENILTVHRAAPTEVDSSKILEPIFPVIELETVEA LHSKFVALIKKSVDLTKFPQGYATRELVKFVSDVIWCSLTRAYYKDKAHLQSLYSFLTGNKLDCFGVAFAVVAAFQVLEY KDVHLALSEDHAWVVFGEDQRETAEVTWHGKGNEDKRGQPITEGVADKSWLYLNGQPVICTRQMEVASIVSGINPSITLS TDSVELAALQQELLWLLHDMGHLDKYPMALGNLGDLEEISHTPEKPPAVRLFEEAIESTKKHYNNQHVYPYTYMGGYHYR RGNYKEALQAWADATSALKNYNYNREDEEIYKEFLDIANNIIPHMMKQIENDNAGRIHHTTILYDPESYANFLRFYDGIC EWEEDSPTPVLHITGDINLKGENGEEEESGESESDSDSETENKDKNQNVTDRKDVNKIEEDLSTKSSARGIRGRKQGRRV GGHTKRSKEEDSTEVNGDSKEEELKSVIEELESKVEESSEKEPINPSISDLAKACGEGILNPDYLLGGEGPFTTANTTMT VSTSTTDSRVDYQEFLSSKSNGSPFMGMTVDSMLKAESPSDMVMYRKRPSSTRTPTPIVDSNSNAELATDEGTVIPSPLP KGPPVLLCLRSEKMKGLKKIFSSPKLNANAIKLQLTAQSQVHFKHNKRSTDSDLAPLRKRHMVWCCRSDQVFPSVLVWKY NK |
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