Gene
| Gene Model ID | pfu_aug2.0_1527.1_24972 |
|---|---|
| Locus | scaffold1527.1 : 47986 ... 63960 : + |
| To GenomeBrowser | scaffold1527.1:47986..63960 |
| Genes list of scaffold | scaffold1527.1 |
| Synonym | pfu_aug1.0_4200.1_59459 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cleft lip and palate transmembrane protein 1 homolog | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1527.1_24972.t1 | 2 | 1 | CLPTM1 | 25 | 166 | 0.0 | 391.9 | 1.1e-22 | 1.6e-18 | 66.7 |
| pfu_aug2.0_1527.1_24972.t1 | 2 | 2 | CLPTM1 | 173 | 448 | 0.0 | 391.9 | 0.0 | 0.0 | 314.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1527.1_24972.t1 | gi|676465439|ref|XP_009057244.1| | hypothetical protein LOTGIDRAFT_233250 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1527.1_24972.t1 | gi|675860510|ref|XP_009015815.1| | hypothetical protein HELRODRAFT_64937 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1527.1_24972.t1 | gi|156547325|ref|XP_001602053.1| | PREDICTED: cleft lip and palate transmembrane protein 1 homolog [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_1527.1_24972.t1 | gi|612025001|ref|XP_007491637.1| | PREDICTED: cleft lip and palate transmembrane protein 1 homolog isoform X3 [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_1527.1_24972.t1 | gi|334328434|ref|XP_001375257.2| | PREDICTED: cleft lip and palate transmembrane protein 1 homolog isoform X1 [Monodelphis domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1527.1_24972.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1527.1_24972.t1 atgaaactttacttcttcaaagttgaggaacacttcaagatttaccttggccagcaggaagctgcacggccaggattttg gggtatggctaagtccttactggtcagaatgtttttcatctatatgataagtagtttcttcagaggacgcagtacaccaa acactaccacaaccccagacactactggacaaagccaaccctctcagtactcacagaatatctacccgaaagatactgta atggatatgtatttatatatatcagaaggagagagattcaaggactttgatgaccctgatgccttattttggtctcagaa aggtttagtgtatggagactggtctagcggtccaaacagtgacggctcttacatcaaatatggaaagatcgctactcctc ctaatgtacagaataatggatctctcttcctacatgtgtatattgtaaagggaggattgtcccccaatcccaaggacaaa ggaaaatacagaagggagtttacaatatacaagtctaaacatgtagatttcctaccagggacaaacaagtactatcctgt tttgtatttcaatgaatattggaaccttaacagtgaatatcaacccatcaatgacactacaaaggagctaaatttgactg tgacattcagtcctatttcactgttcaagtggcagatgtacgcagctcaaggaatgcgtaacaagtggtatagtatgatg ggagtagatatgatggaggaatctgatgaagatcaagactcacttaaggtacgtatactgtataggatagatagagtgta tagtacagtacaaggaatacgtaacaagtggtacagtatgatgggggtagatatgatagaggaatctgatgaagatcaag actcactcaagacaactttcctagaaacaaatccctatttactggcattgacagtgattgtatccattgtacacagtgtg tttgaattcttggccttcaaaaacgatatacagttctggaagaacaggaaatccttggagggtctgtccgtacggtctgt cttctttaacgtcttccagtccctgattgtacttctgtacgtactggaccacgagacaaacttcatgatcagaatcagtg tctttattggacttggtatcgaaatctggaaaattcacaaagtagtaaatgtaaaggtggatacagataatcctatacta ggaattatacctaaagtctactttgaagacaagtccacatatactgaatctcataccaaagaatatgacatgatggcgtt taagtacctgtcatggctgttattcccattgttgattggttacgctatatactcgttgttatatttagaacacaaaggct ggtactcatgggttctaggtatgatgtacggattccttttgacgtttggtaagtag |
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Protein
| Protein ID | pfu_aug2.0_1527.1_24972.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1527.1_24972.t1 MKLYFFKVEEHFKIYLGQQEAARPGFWGMAKSLLVRMFFIYMISSFFRGRSTPNTTTTPDTTGQSQPSQYSQNIYPKDTV MDMYLYISEGERFKDFDDPDALFWSQKGLVYGDWSSGPNSDGSYIKYGKIATPPNVQNNGSLFLHVYIVKGGLSPNPKDK GKYRREFTIYKSKHVDFLPGTNKYYPVLYFNEYWNLNSEYQPINDTTKELNLTVTFSPISLFKWQMYAAQGMRNKWYSMM GVDMMEESDEDQDSLKVRILYRIDRVYSTVQGIRNKWYSMMGVDMIEESDEDQDSLKTTFLETNPYLLALTVIVSIVHSV FEFLAFKNDIQFWKNRKSLEGLSVRSVFFNVFQSLIVLLYVLDHETNFMIRISVFIGLGIEIWKIHKVVNVKVDTDNPIL GIIPKVYFEDKSTYTESHTKEYDMMAFKYLSWLLFPLLIGYAIYSLLYLEHKGWYSWVLGMMYGFLLTFGK |
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