Gene
| Gene Model ID | pfu_aug2.0_1527.1_24974 |
|---|---|
| Locus | scaffold1527.1 : 76739 ... 97375 : - |
| To GenomeBrowser | scaffold1527.1:76739..97375 |
| Genes list of scaffold | scaffold1527.1 |
| Synonym | pfu_aug1.0_4200.1_59460 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1527.1_24974.t1 | 2 | 1 | PDZ | 183 | 240 | 2.1e-06 | 27.7 | 1.0e-09 | 7.7e-06 | 26.0 |
| pfu_aug2.0_1527.1_24974.t1 | 2 | 2 | PDZ | 423 | 446 | 2.1e-06 | 27.7 | 1.5 | 11000.0 | -3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1527.1_24974.t1 | gi|676471353|ref|XP_009059151.1| | hypothetical protein LOTGIDRAFT_164375 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1527.1_24974.t1 | gi|746854278|ref|XP_011057772.1| | PREDICTED: uncharacterized protein LOC105148024 [Acromyrmex echinatior] | 2.0e-29 |
| pfu_aug2.0_1527.1_24974.t1 | gi|642916547|ref|XP_008191645.1| | PREDICTED: uncharacterized protein LOC103312116 [Tribolium castaneum] | 5.0e-29 |
| pfu_aug2.0_1527.1_24974.t1 | gi|759065128|ref|XP_011341987.1| | PREDICTED: uncharacterized protein LOC105282030 isoform X1 [Cerapachys biroi] | 1.0e-28 |
| pfu_aug2.0_1527.1_24974.t1 | gi|383853742|ref|XP_003702381.1| | PREDICTED: uncharacterized protein LOC100882583 [Megachile rotundata] | 2.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_1527.1_24974.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1527.1_24974.t1 atgagcgacctgacgcgagtgattctgtgttttgtgctgttttgcatccttggagttgtgcgcgctcaggagccttgcga ggaaccaaatgttgcagtgattgtgctggcgagcgtctttggaactttagcagtagtttttatcactctgggaattatat gttttctgttgtggaagaggagacgagatctgagccgaccacctgacacacctgaaaagaacaaccttaaagataatgac cacggcgctagatccccggatggaggattctcaaacccagctttctccgagactgatggtcaaggcgacttgggtctggc cgaagaaggagctggtgggtacgtgcgttgcagagaacatatcacacctgaaaagaagtcaagcaaagatggaaagaagg actctaacaaaaagacgtggaactccctacccaggggcgaccttcccccaggccccacccataatggttccattggctcg ctggatgatcatttcatttctgctgatcctgaggtgacgagcgtctggttacagagtcaggatttcattggtctagggtt taacatcgctggtagtatgagggacggtatctatatcagtcaggtccataacagaggcccggctgtggagtctgggaaat tcaaaataggtgacaggatccttagcgtgacaatatcttttgagaacatggtatacgaggacgctttgaccattctgagc tatgcttctccctatcctgtcaaagtcactctccagaaggagctcaccacgtccaaaaataggaaaccaagtgatgcata ttcaaatctcagtcaccctttgtataggagccaatcagtggacaccatttcgaaaatcggcaaagagacaacattcgttc ccaagagaagtttgagtctggcgagccaaaacattcttgaggaccgactaaagaaaagtcctttaatgacaaaattctca tttgaaaaggaatcgatacgagaatctcaggaaatgttcaaacacgatacctcattctcagagctcaaagttgataccaa cttaccgatttctacaacagttgagatcaataccccacctgaggaagctaacaaaaaagtggaggaaattttccaggctg aggaaactgtaaataatgagtcagccccatctgtatcaactctaacaccgccagaggagtttacccagggagatgacggt aaaccgccaccagagccattggtcccacctccgcctcttgattttgataccacagattcaacaagtacaactcaggtttc atcagttgctgccgagtactcggctttatttgacagtcttaacgagcaagacaaattggatatgttgcgtctaagctacg aggaccctgatgactcatttaactacagtcacaacactgttactatggaaacgtccttgacagagggagagtcgagtgct aacacagtgatagacttggaccctaaatcacctgcaccaatcaaacctgagaggaggaagaaaaagagttcaaatggaag tgtatcgtctgctgagccatctccacgacttctaccggaaccagacggcgtggatgatgacgtaattgcgccagtttcta tggaaactgtacagtgttcgccttctacggatgagataaatgaggacgtgattatgcctgaaagtaaaacgagagatgtg tcgattttatcaaaaagtattgaattttcggtaattagtaataacaatgatgccatggaggacgagcctgaatcaccacg caattcaagtaaaactctcgtagactatagtctgtctgacatggaaaatactgtcagaccacaaacaccagaaaatcatg tggtagaggaagatatgattaccccagtgcaaaacaaacggggaaacttggaaagttcattaaaagtcttcagtaattcc gacacttctgtaaccccaactccttctacggcttcatatagagaaaatgtgaaggacacgagcagtgacagttcagacgc tgacaaaagtgatacaaaaggaccaaacacgaccataggaagtgttgatttcaacttaaatatgacttctgatcctactt tattttccacaccatatcccagcagaaatacaaaggaagcatccagtgggatgtcttacgatatttcaatgatggaattg aatgacattgagaacaaacttcagaaagaacccaaggaaatgggaaagggagggatatcattcgaaataagagatgacgt ggtttccggcggaactttattgactagtgtctcaaaaactgtgagtaattctgagtatcacgtatcaaggacgcggtcat atcaggatgtaggcgaaacggagaaaatcaagttgcaaaggcctgcatcgttcaaagaggactattctacgtcaggcagc aatatggaaaatgacaatactctcgattggtccgggaaacgactcgtgcgagctgggtctttctcggaaatagcacaaga cgccgaacaagactgggtggatcataataggatagataaagatgaaaatgaagatagttcgataggtaataaccgcgatt tgaattcgtccgaggaaagcttagaacaatcagaaagaaaaggactgtcaaagccgacaatgtttcgagctagagaaaat ctagctaatttgtcgtccgagaattcagactcgttacagtcaatcacgagctccagtagaggctcgactcctccccctcc gtatacagccaatgggaacgaagatcaaggactgggtacctccccagaaagttctcctattaaagttcctctgaatatca atgaccttaatacctcaggactgattgatgttatacctaccgatacatccatcaatacagacaattctgttgttacctca acagtggaaagtaacagcaattttgctgttaccgtagaatcaagtcatggggatgaggcagactgctag |
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Protein
| Protein ID | pfu_aug2.0_1527.1_24974.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1527.1_24974.t1 MSDLTRVILCFVLFCILGVVRAQEPCEEPNVAVIVLASVFGTLAVVFITLGIICFLLWKRRRDLSRPPDTPEKNNLKDND HGARSPDGGFSNPAFSETDGQGDLGLAEEGAGGYVRCREHITPEKKSSKDGKKDSNKKTWNSLPRGDLPPGPTHNGSIGS LDDHFISADPEVTSVWLQSQDFIGLGFNIAGSMRDGIYISQVHNRGPAVESGKFKIGDRILSVTISFENMVYEDALTILS YASPYPVKVTLQKELTTSKNRKPSDAYSNLSHPLYRSQSVDTISKIGKETTFVPKRSLSLASQNILEDRLKKSPLMTKFS FEKESIRESQEMFKHDTSFSELKVDTNLPISTTVEINTPPEEANKKVEEIFQAEETVNNESAPSVSTLTPPEEFTQGDDG KPPPEPLVPPPPLDFDTTDSTSTTQVSSVAAEYSALFDSLNEQDKLDMLRLSYEDPDDSFNYSHNTVTMETSLTEGESSA NTVIDLDPKSPAPIKPERRKKKSSNGSVSSAEPSPRLLPEPDGVDDDVIAPVSMETVQCSPSTDEINEDVIMPESKTRDV SILSKSIEFSVISNNNDAMEDEPESPRNSSKTLVDYSLSDMENTVRPQTPENHVVEEDMITPVQNKRGNLESSLKVFSNS DTSVTPTPSTASYRENVKDTSSDSSDADKSDTKGPNTTIGSVDFNLNMTSDPTLFSTPYPSRNTKEASSGMSYDISMMEL NDIENKLQKEPKEMGKGGISFEIRDDVVSGGTLLTSVSKTVSNSEYHVSRTRSYQDVGETEKIKLQRPASFKEDYSTSGS NMENDNTLDWSGKRLVRAGSFSEIAQDAEQDWVDHNRIDKDENEDSSIGNNRDLNSSEESLEQSERKGLSKPTMFRAREN LANLSSENSDSLQSITSSSRGSTPPPPYTANGNEDQGLGTSPESSPIKVPLNINDLNTSGLIDVIPTDTSINTDNSVVTS TVESNSNFAVTVESSHGDEADC |
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