Gene
| Gene Model ID | pfu_aug2.0_1531.1_05107 |
|---|---|
| Locus | scaffold1531.1 : 17581 ... 23785 : - |
| To GenomeBrowser | scaffold1531.1:17581..23785 |
| Genes list of scaffold | scaffold1531.1 |
| Synonym | pfu_aug1.0_7934.1_45766 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1531.1_05107.t1 | 2 | 1 | LRAT | 199 | 327 | 6.9e-23 | 80.9 | 2.6e-18 | 1.3e-14 | 54.2 |
| pfu_aug2.0_1531.1_05107.t1 | 2 | 2 | LRAT | 390 | 504 | 6.9e-23 | 80.9 | 1.8e-10 | 9.1e-07 | 28.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1531.1_05107.t1 | gi|702511645|ref|XP_010040859.1| | PREDICTED: lecithin retinol acyltransferase-like [Eucalyptus grandis] | 4.0e-06 |
| pfu_aug2.0_1531.1_05107.t1 | gi|702457093|ref|XP_010027166.1| | PREDICTED: uncharacterized protein LOC104417622 [Eucalyptus grandis] | 5.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_1531.1_05107.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1531.1_05107.t1 atggcagagtcatccgaagatgtcttcgaaacgattgtgcatatttctcaacatggttcccaatcagaatctcaaagcct gggaaatcaacctgaaaataaaacaaatacggcagaacctttaattgcgcatagtctccaacttcctgagtgttttgaca agtttcctgatttactccaaagacccctgtctggattaagcattaataaaatatctgctcgacgaccgtctcaacgccta gaaagtctagccgaggatgtacctgattcgacagaaccncaaagcctgggaaatcaacctgaaaataaaacaaatacggc agaacctttaattgcgcatagtctccaacttcctgagtgttttgacaagtttcctgatttactccaaagacccctgtctg gattaagcattaataaaatatctgctcgacgaccgtctcaacgcctagaaagtctagccgaggatgtacctgatctgaca gaacatacttcaagcggacaacagccaattaatccggataacctcataaaaaaatcaaatattctattttcatcttcttg tatagaatgcgtaaaagctattcctgtacggaacaggaaagacgtaaaagttggggatcatatcattaattctggtattc tatatgatcatcatgccattgttattgacatactacctgatgaaaaagatgaagacaatcataaaaaggcaagaagtaag cttatccattcaacaaacagtatatgtggggcgtttgctggactgtttaaattatttggcggcaaagcaaaaatacttca aacttctgaatgttttgatttcgaaaggtgtaaaataatggtcgtgaagtatatacgatccccgtttggacccagcgaag tagtgcgccgagcaaagaaaaaacatcaggataaagacttcaaataccacgttttcagaaataattgcgaacattttgct acttattgtgtcacaggtgagcgattcagcgtccagattaacaaactcattcttgctatgagaatgctgttacctctgtg gcttaaaggtctcttagacgaaaagtttagaaacaagctggcttatgaaagaggtatgatatgcaaaccttgttttaaaa ggaatgagtggcttttcgcggcaaagaaaaagcccattaacgcactgagcgaagttaagaaaggcgatctaattactttt ccgtattggtattttgaccacaatgccatagtcatggaaacacacgcagaaggacctcagaaccgacataaaaaagttgg tctgacaattgcccattatgcattctgtggaccttttcagcaccacacaataatcctagaaaggagatcgttcaatctag atggatcagtgacagtgacaatgtacgaaagccctgaatacaatgtcttcagtccagatgaaacggttgaaagggccaag aaacgaataaatgaacaacaatatacctattttgcaaataactctagtcatttcgcacgttggtgtaaacttaaacgaac caaatcaatctctttatcccagtatcggctaggtgacagccagtctgaaactgaaataaattga |
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Protein
| Protein ID | pfu_aug2.0_1531.1_05107.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1531.1_05107.t1 MAESSEDVFETIVHISQHGSQSESQSLGNQPENKTNTAEPLIAHSLQLPECFDKFPDLLQRPLSGLSINKISARRPSQRL ESLAEDVPDSTEXQSLGNQPENKTNTAEPLIAHSLQLPECFDKFPDLLQRPLSGLSINKISARRPSQRLESLAEDVPDLT EHTSSGQQPINPDNLIKKSNILFSSSCIECVKAIPVRNRKDVKVGDHIINSGILYDHHAIVIDILPDEKDEDNHKKARSK LIHSTNSICGAFAGLFKLFGGKAKILQTSECFDFERCKIMVVKYIRSPFGPSEVVRRAKKKHQDKDFKYHVFRNNCEHFA TYCVTGERFSVQINKLILAMRMLLPLWLKGLLDEKFRNKLAYERGMICKPCFKRNEWLFAAKKKPINALSEVKKGDLITF PYWYFDHNAIVMETHAEGPQNRHKKVGLTIAHYAFCGPFQHHTIILERRSFNLDGSVTVTMYESPEYNVFSPDETVERAK KRINEQQYTYFANNSSHFARWCKLKRTKSISLSQYRLGDSQSETEIN |
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