Gene
| Gene Model ID | pfu_aug2.0_15330.1_03203 |
|---|---|
| Locus | scaffold15330.1 : 1 ... 2379 : - |
| To GenomeBrowser | scaffold15330.1:1..2379 |
| Genes list of scaffold | scaffold15330.1 |
| Synonym | pfu_aug1.0_16264.1_03691 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| src kinase-associated phosphoprotein 1 | GO:0009987 GO:0016740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15330.1_03203.t1 | 1 | 1 | PH | 14 | 116 | 5.8e-11 | 42.5 | 2.5e-14 | 7.5e-11 | 42.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15330.1_03203.t1 | gi|32169288|emb|CAD88601.1| | SRC Kinase Associated Phosphoprotein 2 [Crassostrea gigas] | 0.0 |
| pfu_aug2.0_15330.1_03203.t1 | gi|676432086|ref|XP_009046460.1| | hypothetical protein LOTGIDRAFT_212502 [Lottia gigantea] | 7.0e-26 |
| pfu_aug2.0_15330.1_03203.t1 | gi|22316138|emb|CAD44461.1| | novel protein similar to human SRC kinase associated adaptor protein (SKAP55 homologue) [Danio rerio] | 2.0e-21 |
| pfu_aug2.0_15330.1_03203.t1 | gi|688579827|ref|XP_009304913.1| | PREDICTED: src kinase-associated phosphoprotein 1 isoform X1 [Danio rerio] | 1.0e-20 |
| pfu_aug2.0_15330.1_03203.t1 | gi|121583806|ref|NP_001073480.1| | src kinase-associated phosphoprotein 1 [Danio rerio] | 1.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_15330.1_03203.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15330.1_03203.t1 acattccagtgatagcagcaagtgatattaagtacccacttattgaaggcttcctggagaaaaaacaaaagagaggaaca ttgtttggtgcaccaagacttcagaagcgatggtgtgctataaaagccagtacaatgtactactacgagagtcagaaaga gaagaaacagcacggtgctttctacctgaacggttacagctttgaactggcaccagatgtggtagacaaaaaggatgcat ccaaaaaagacttgagtttccagctagtttctgtaggcaaaaggacttaccagtttgtagcactgaacaaggatgacctt gacaaatggaaggaggccatacagaaggcagcttgtgtagaagtcggaggagaggatgaagcag |
|
Protein
| Protein ID | pfu_aug2.0_15330.1_03203.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15330.1_03203.t1 IPVIAASDIKYPLIEGFLEKKQKRGTLFGAPRLQKRWCAIKASTMYYYESQKEKKQHGAFYLNGYSFELAPDVVDKKDAS KKDLSFQLVSVGKRTYQFVALNKDDLDKWKEAIQKAACVEVGGEDEA |
|