Gene
| Gene Model ID | pfu_aug2.0_15361.1_06550 |
|---|---|
| Locus | scaffold15361.1 : 1 ... 2367 : - |
| To GenomeBrowser | scaffold15361.1:1..2367 |
| Genes list of scaffold | scaffold15361.1 |
| Synonym | pfu_aug1.0_5425.1_45212 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| t-complex protein 1 subunit delta-like | GO:0005524 GO:0005737 GO:0006457 GO:0016740 GO:0051082 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15361.1_06550.t1 | 1 | 1 | Cpn60_TCP1 | 2 | 110 | 5.2e-25 | 88.0 | 3.8e-29 | 5.6e-25 | 87.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15361.1_06550.t1 | gi|676433711|ref|XP_009046989.1| | hypothetical protein LOTGIDRAFT_199820 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_15361.1_06550.t1 | gi|524873378|ref|XP_005093436.1| | PREDICTED: T-complex protein 1 subunit delta-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_15361.1_06550.t1 | gi|524873376|ref|XP_005093435.1| | PREDICTED: T-complex protein 1 subunit delta-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_15361.1_06550.t1 | gi|524873374|ref|XP_005093434.1| | PREDICTED: T-complex protein 1 subunit delta-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_15361.1_06550.t1 | gi|115748959|ref|XP_784913.2| | PREDICTED: T-complex protein 1 subunit delta [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_15361.1_06550.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15361.1_06550.t1 agatgctgttagtgatttagctttacatttcctggccaagatgaagatcatggtggtcaaagacatagagagagaagata tagagtttatctgcaagagtttagcatgtaagccagtagctagccttgatcactttacaccagagaacttgggaagtgca gatctgatagaggaagtccaaacaggaacaagtaaaattgtcaagattactggtatagccaatccagggaagacgatgac agtactgatacgaggctccaataagctcgtactggaggaggctgatagatctatacatgatgccctctgtgttattagat gtcttgttaagaaaag |
|
Protein
| Protein ID | pfu_aug2.0_15361.1_06550.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15361.1_06550.t1 DAVSDLALHFLAKMKIMVVKDIEREDIEFICKSLACKPVASLDHFTPENLGSADLIEEVQTGTSKIVKITGIANPGKTMT VLIRGSNKLVLEEADRSIHDALCVIRCLVKK |
|