Gene
| Gene Model ID | pfu_aug2.0_1537.1_24981 |
|---|---|
| Locus | scaffold1537.1 : 10887 ... 16345 : - |
| To GenomeBrowser | scaffold1537.1:10887..16345 |
| Genes list of scaffold | scaffold1537.1 |
| Synonym | pfu_aug1.0_1841.1_51430 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1537.1_24981.t1 | 1 | 1 | Transmemb_17 | 16 | 123 | 4.5e-30 | 104.1 | 7.6e-34 | 5.7e-30 | 103.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1537.1_24981.t1 | gi|676484889|ref|XP_009063487.1| | hypothetical protein LOTGIDRAFT_204590 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1537.1_24981.t1 | gi|585644075|ref|XP_006813800.1| | PREDICTED: transmembrane protein 216-like [Saccoglossus kowalevskii] | 5.04467e-44 |
| pfu_aug2.0_1537.1_24981.t1 | gi|390369707|ref|XP_799067.2| | 9.99967e-42 | |
| pfu_aug2.0_1537.1_24981.t1 | gi|390333667|ref|XP_796540.3| | 1.99993e-41 | |
| pfu_aug2.0_1537.1_24981.t1 | gi|524908168|ref|XP_005109190.1| | PREDICTED: transmembrane protein 216-like [Aplysia californica] | 2.0e-40 |
Transcript
| Transcript ID | pfu_aug2.0_1537.1_24981.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24981.t1 atgctaggccgtgtacagataattagatcatcacttccataccaagtcttactgtatttgaatggatggtattttggatt tttcttcctctgtgaggttcttatctttgcatttaaaggtgagaccttgccatatccccaaaacgtcctacccgcagaaa ttatactcttatttattttgactggtattgaagcactgagaattttttttgctatcaaaggtaacctgacggagcgagga ataggtgtatttgtttctctattactgagtatcccagcatgccttggtgccgtatttctattgttgtggcagacatatgt tttaagagttgatgtgatattagcagccattcagttagcattcattggatttgagttgatatttggccttatctccatta taacatttgcaagagcaactccatactaa |
|
Protein
| Protein ID | pfu_aug2.0_1537.1_24981.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24981.t1 MLGRVQIIRSSLPYQVLLYLNGWYFGFFFLCEVLIFAFKGETLPYPQNVLPAEIILLFILTGIEALRIFFAIKGNLTERG IGVFVSLLLSIPACLGAVFLLLWQTYVLRVDVILAAIQLAFIGFELIFGLISIITFARATPY |
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