Gene
| Gene Model ID | pfu_aug2.0_1537.1_24983 |
|---|---|
| Locus | scaffold1537.1 : 44996 ... 57997 : + |
| To GenomeBrowser | scaffold1537.1:44996..57997 |
| Genes list of scaffold | scaffold1537.1 |
| Synonym | pfu_aug1.0_15280.1_39682 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| centrosomal protein of 120 kda-like | GO:0000226 GO:0005813 GO:0008283 GO:0030900 GO:0050789 GO:0051179 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1537.1_24983.t1 | 2 | 1 | DUF3668 | 17 | 340 | 0.0 | 333.6 | 0.0 | 0.0 | 330.7 |
| pfu_aug2.0_1537.1_24983.t1 | 2 | 2 | DUF3668 | 854 | 896 | 0.0 | 333.6 | 0.1 | 1500.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1537.1_24983.t1 | gi|530636767|ref|XP_005305213.1| | PREDICTED: centrosomal protein of 120 kDa isoform X3 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_1537.1_24983.t1 | gi|21752271|dbj|BAC04155.1| | 0.0 | |
| pfu_aug2.0_1537.1_24983.t1 | gi|50950037|emb|CAH10561.1| | hypothetical protein [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1537.1_24983.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24983.t1 atgccatcgtatcgattccagggtacatggcaattatactcaatcctaggacgaagatttccaaagagagtgaaacataa gattattgccgaggctaggtttgatggtgagctgctagccactgatcctgtggagcatgtagagacacctaactttaccc aggagttggcatgggaacttgatcgtagaggattacaacaacaccggctgcagaggacgtctattaaaatacaatgttac gcgtgtgatagtgttagcacagtgaaggaggccataggttacatcatcttagacctacgatctgtcagcaataaacagac acccaagtggtatccattactccattctaagtacagtaaaaataaaagtgagatcaaactttcaatttatctggatgaag atggtggtaaaggggagacaactgattctaacttcagagcgaaggaggcccctgccagattggtagataccataccttca ccaaagatagatgcccatcatctgaaaccagtgttaaatgaagctgagggatactaccagattggttctatgtcacaatg taaagaatacttcgtcctctctgttacaatctcccatgctgttaatttagcccagttgattccaagcactgctcatttgc cagaaacaagtgactatttcttctacttttccttactggggaatgacatcacaaatgaaccattcaaagatttgatgaat cctaattttcctgcagaaagggcctcagtcagaattaagagtaacgtcaatacactgttgttgttcttcagtcatcagcc aggaattcaggtgcacctgtgttgtggagatcaatcattagggagctgtgagatccccctgaatagcttgttacagaaaa acagtacagaaatcttcatgaggccagttgtcatagagggtatcttccagctcatccctcctaataaaagccgagctctc cttcccagcattcctgatgatttagcggcagcagtgggtgtgtctatagtcctacgcagggaagaaacgacgactggaaa tcaagaaaaagttccagagatgaaagattcaactcctcagaagaaacacccaccaagatcaccagaaatgaaaagaccga tagataacaaaacaacaataaaggaaatcaacataacaaatgaagatatagaatcacctactcatataaaaaaggcagct agggatacagacatgctggacgacacccataatgattataatacggaggaaaatatcagcagtctggaagaagataaaca tagagaaaaaactgctaaagtgcagggaacagtcaaagccaagacagaaagagacaaaccacctcctgctagatcgtctc accacaatcaaacaggtgtggtagtatcagagagtcaaacatcaggtatgccacttatagttgaggtgtttcacaaggac aaacaactctccaacaacgtattactaggaagtgctaagttaccactagagcaggtcatgaatgcagaaaagttccgtaa tgttagcaataagggaagtcctggttggagacaaacactaagtgaatctgtcactgtttattcctctgaaaataaaagcc gagcaggcacgataagttttgtccttggtctggatgattggggtcctatatcatcacaacagattgtaatgcagcaggaa tcttcatctaatactcagggtcttgcagagccatttaccagtagtaaaggtaaaccctccatgtcacccaaacacacaga ggcacctagggaaacagccgaataccaggccgcggtggaactagaaatgtggaaggaaagccaagaaagacagtttgaaa ctcagttgaagcaaaaggaaatggcatacatgaaggcacttacagaggaatggaagaaaagagacaaggaaagagagata ctaatgaagaaaaagatgtcagaatacgcaggaatggaagagaagttacataaaacattggccgacctggaaaaaaggga gaaacaactagcttttaacgaacaagagactgctcgaatgagacagcagttacacagggagcatgagaccaagttacagg aaatgaaggaggcatctcacaggttaaaggaggactgtaaccatcaagtagaactagagagattgaagataaaagaactt gaaattttgatggagcgccacaaaaatgaggttagagagatggaaaagaaatatcataacctggagaaagaatttgaggc ttataaagaacaacagaacagtaaaccagaagtcagacttcagtctgagatcaacctacttacactggaaaaggtggaat tagagaggaagcttgacgcagtaacaaagtctaaagtacattacaaacaacaatgggggagagccttgaaagaactagct aaggccaaacagaaggaacagacctttgccaaggccgagcttaaacgacagcaacaggagctggagcacatgaggttacg atacttggccgcagaggagagggacgtagtacagtcagagaaaaaggaactagaggatctgaaaaatgaactctcaagat taaagaaagtagaagaggagagatctaagttgtcacctcgtagtcccagagaaggttaccaatcagttactccggacatg aacacaagcttagatgatcatattactcgacttatagaggaaagagacactttactaaggactggtgtttattccacaca tgacaaaataatcgctgaattagatagacaaattagagaatcactagcccagaaaaaatcaaacttattataa |
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Protein
| Protein ID | pfu_aug2.0_1537.1_24983.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24983.t1 MPSYRFQGTWQLYSILGRRFPKRVKHKIIAEARFDGELLATDPVEHVETPNFTQELAWELDRRGLQQHRLQRTSIKIQCY ACDSVSTVKEAIGYIILDLRSVSNKQTPKWYPLLHSKYSKNKSEIKLSIYLDEDGGKGETTDSNFRAKEAPARLVDTIPS PKIDAHHLKPVLNEAEGYYQIGSMSQCKEYFVLSVTISHAVNLAQLIPSTAHLPETSDYFFYFSLLGNDITNEPFKDLMN PNFPAERASVRIKSNVNTLLLFFSHQPGIQVHLCCGDQSLGSCEIPLNSLLQKNSTEIFMRPVVIEGIFQLIPPNKSRAL LPSIPDDLAAAVGVSIVLRREETTTGNQEKVPEMKDSTPQKKHPPRSPEMKRPIDNKTTIKEINITNEDIESPTHIKKAA RDTDMLDDTHNDYNTEENISSLEEDKHREKTAKVQGTVKAKTERDKPPPARSSHHNQTGVVVSESQTSGMPLIVEVFHKD KQLSNNVLLGSAKLPLEQVMNAEKFRNVSNKGSPGWRQTLSESVTVYSSENKSRAGTISFVLGLDDWGPISSQQIVMQQE SSSNTQGLAEPFTSSKGKPSMSPKHTEAPRETAEYQAAVELEMWKESQERQFETQLKQKEMAYMKALTEEWKKRDKEREI LMKKKMSEYAGMEEKLHKTLADLEKREKQLAFNEQETARMRQQLHREHETKLQEMKEASHRLKEDCNHQVELERLKIKEL EILMERHKNEVREMEKKYHNLEKEFEAYKEQQNSKPEVRLQSEINLLTLEKVELERKLDAVTKSKVHYKQQWGRALKELA KAKQKEQTFAKAELKRQQQELEHMRLRYLAAEERDVVQSEKKELEDLKNELSRLKKVEEERSKLSPRSPREGYQSVTPDM NTSLDDHITRLIEERDTLLRTGVYSTHDKIIAELDRQIRESLAQKKSNLL |
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