Gene
| Gene Model ID | pfu_aug2.0_1537.1_24984 |
|---|---|
| Locus | scaffold1537.1 : 60548 ... 68435 : - |
| To GenomeBrowser | scaffold1537.1:60548..68435 |
| Genes list of scaffold | scaffold1537.1 |
| Synonym | pfu_aug1.0_11085.1_68272 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1537.1_24984.t1 | 2 | 1 | PrmA | 77 | 145 | 1.9e-08 | 33.8 | 0.8 | 540.0 | -0.6 |
| pfu_aug2.0_1537.1_24984.t1 | 4 | 1 | Methyltransf_11 | 112 | 135 | 5.4e-08 | 33.2 | 3.8 | 2600.0 | -1.0 |
| pfu_aug2.0_1537.1_24984.t1 | 3 | 1 | Methyltransf_25 | 112 | 155 | 3.3e-06 | 27.4 | 1.8 | 1200.0 | -0.2 |
| pfu_aug2.0_1537.1_24984.t1 | 3 | 1 | Methyltransf_18 | 114 | 141 | 1.9e-08 | 34.8 | 7.3 | 4900.0 | -2.0 |
| pfu_aug2.0_1537.1_24984.t1 | 3 | 1 | Methyltransf_31 | 124 | 147 | 9.5e-11 | 41.5 | 3.7 | 2500.0 | -2.1 |
| pfu_aug2.0_1537.1_24984.t1 | 1 | 1 | Methyltransf_9 | 193 | 297 | 5.6e-08 | 31.8 | 1.8e-10 | 1.2e-07 | 30.7 |
| pfu_aug2.0_1537.1_24984.t1 | 2 | 2 | PrmA | 197 | 273 | 1.9e-08 | 33.8 | 9.8e-11 | 6.6e-08 | 32.0 |
| pfu_aug2.0_1537.1_24984.t1 | 3 | 2 | Methyltransf_31 | 200 | 274 | 9.5e-11 | 41.5 | 2.8e-13 | 1.9e-10 | 40.5 |
| pfu_aug2.0_1537.1_24984.t1 | 1 | 1 | MTS | 200 | 273 | 4.7e-07 | 29.3 | 1.4e-09 | 9.3e-07 | 28.3 |
| pfu_aug2.0_1537.1_24984.t1 | 3 | 2 | Methyltransf_18 | 201 | 275 | 1.9e-08 | 34.8 | 1.3e-10 | 8.8e-08 | 32.7 |
| pfu_aug2.0_1537.1_24984.t1 | 2 | 1 | PRMT5 | 202 | 279 | 6.6e-12 | 45.0 | 2.0e-05 | 0.014 | 14.3 |
| pfu_aug2.0_1537.1_24984.t1 | 1 | 1 | Methyltransf_26 | 202 | 273 | 1.3e-08 | 34.8 | 5.1e-11 | 3.4e-08 | 33.5 |
| pfu_aug2.0_1537.1_24984.t1 | 3 | 2 | Methyltransf_25 | 204 | 275 | 3.3e-06 | 27.4 | 6.2e-08 | 4.2e-05 | 23.8 |
| pfu_aug2.0_1537.1_24984.t1 | 4 | 2 | Methyltransf_11 | 205 | 276 | 5.4e-08 | 33.2 | 1.6e-09 | 1.1e-06 | 29.0 |
| pfu_aug2.0_1537.1_24984.t1 | 4 | 3 | Methyltransf_11 | 296 | 322 | 5.4e-08 | 33.2 | 0.54 | 360.0 | 1.7 |
| pfu_aug2.0_1537.1_24984.t1 | 2 | 2 | PRMT5 | 308 | 495 | 6.6e-12 | 45.0 | 4.9e-10 | 3.3e-07 | 29.5 |
| pfu_aug2.0_1537.1_24984.t1 | 3 | 3 | Methyltransf_31 | 399 | 439 | 9.5e-11 | 41.5 | 1.1 | 710.0 | -0.3 |
| pfu_aug2.0_1537.1_24984.t1 | 3 | 3 | Methyltransf_18 | 414 | 437 | 1.9e-08 | 34.8 | 6.2 | 4200.0 | -1.7 |
| pfu_aug2.0_1537.1_24984.t1 | 4 | 4 | Methyltransf_11 | 415 | 441 | 5.4e-08 | 33.2 | 6.1 | 4100.0 | -1.7 |
| pfu_aug2.0_1537.1_24984.t1 | 3 | 3 | Methyltransf_25 | 425 | 439 | 3.3e-06 | 27.4 | 1.7 | 1100.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1537.1_24984.t1 | gi|507533624|ref|XP_004650872.1| | PREDICTED: protein arginine N-methyltransferase 3 isoform X2 [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_1537.1_24984.t1 | gi|507533622|ref|XP_004650871.1| | PREDICTED: protein arginine N-methyltransferase 3 isoform X1 [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_1537.1_24984.t1 | gi|584067257|ref|XP_006754033.1| | PREDICTED: protein arginine N-methyltransferase 3 [Myotis davidii] | 0.0 |
| pfu_aug2.0_1537.1_24984.t1 | gi|558152284|ref|XP_006094849.1| | PREDICTED: protein arginine N-methyltransferase 3 isoform X2 [Myotis lucifugus] | 0.0 |
| pfu_aug2.0_1537.1_24984.t1 | gi|554549872|ref|XP_005869464.1| | PREDICTED: protein arginine N-methyltransferase 3 [Myotis brandtii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1537.1_24984.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24984.t1 atgagtgcagaggatctaatgaagttaggagtatctgacaaaccatgggacgcggaggaatatatgaagcctcactgtgt agacgaccctctacttcagtttgatattgaagaagagttagatatggagactagtggaccatgttatgaggtatctgaaa gaggtgatgacttgattgtcacttgtctcagtacagcggcaaataccgggcatattgaaatgaaggaaaaacatgaagaa cagactcaactcaatgccactggagatctaggtgctacatcatgtgataatgaagatatgacaatagactcaaagtgcat gaaacaaaaactagaagaaatgaatggatctgatccgtcgaaggaagtaatggtacagctctgtcaacaattagaaaaca ctgaattacaaaatcaacaattggagaatcagctaaaaagagccatggaagacctaaggcaaatgaggttagcagcagct gatttttttcttccaagtgaagaggacaaagccatggccatgaagaataccctatcttctgaagatgaggcatactttga ttcctactcacatttcagtattcatgaagaaatgcttaaggacaaggttgtactggatgtcgggtgcggtacggggattc tgaccatgtttgctgcgactgctggtgccaagcttgttataggagtggaacagtccgatatcatacatcatgcttatcaa attgtcagggagaacaaacttgaagataaagttaagctaatcaaaggtcggatggaggatgtagatttaccagtagaaaa agttgatatcattatttctgaatggatgggctactttctgttgtttgaatccatgttggactcggttatatttgccaggg acaaatactgtacagatacgggtgtgggtcggatggaggatgtagatttaccagtagaaaaagttgatatcattatttct gaatggatgggctactttctgttgtttgaatccatgttggactcggttatatttgccagggacaaatactgtacagatac gggtgtggtctacccagacagaagtacaattcacctagcattactaagtgatgaggagatgtataaagagaggatagaat tctggaaggacgtgtacgggtttaatatggattgtataacaaaagaagtggtacgagaggccgccatcagcacagtagac aaggccaaaatcgtctccagggatgtggtgttcaaggacattgatatctgtcgatgtaatacatcagatctacagttcac ggaggattttagcgtagtctgctgtagagatgctacagtccatgctgtcgtgggatactttaatgtccatttccaacaaa gatgcaataaagaggttgtgatttgtacaggacctcagtctacatctactcattggaaacaaactgtgttcttattacac catcctctcacagtaaacaaagatgaagtcatcaaaggttcaattgctgtttcaaaatgcaggagagaacagcggtcctt gaaagtgaaattgactcttggagagcggactgaaacttatataatgcaataa |
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Protein
| Protein ID | pfu_aug2.0_1537.1_24984.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24984.t1 MSAEDLMKLGVSDKPWDAEEYMKPHCVDDPLLQFDIEEELDMETSGPCYEVSERGDDLIVTCLSTAANTGHIEMKEKHEE QTQLNATGDLGATSCDNEDMTIDSKCMKQKLEEMNGSDPSKEVMVQLCQQLENTELQNQQLENQLKRAMEDLRQMRLAAA DFFLPSEEDKAMAMKNTLSSEDEAYFDSYSHFSIHEEMLKDKVVLDVGCGTGILTMFAATAGAKLVIGVEQSDIIHHAYQ IVRENKLEDKVKLIKGRMEDVDLPVEKVDIIISEWMGYFLLFESMLDSVIFARDKYCTDTGVGRMEDVDLPVEKVDIIIS EWMGYFLLFESMLDSVIFARDKYCTDTGVVYPDRSTIHLALLSDEEMYKERIEFWKDVYGFNMDCITKEVVREAAISTVD KAKIVSRDVVFKDIDICRCNTSDLQFTEDFSVVCCRDATVHAVVGYFNVHFQQRCNKEVVICTGPQSTSTHWKQTVFLLH HPLTVNKDEVIKGSIAVSKCRREQRSLKVKLTLGERTETYIMQ |
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