Gene
| Gene Model ID | pfu_aug2.0_1537.1_24985 |
|---|---|
| Locus | scaffold1537.1 : 70736 ... 76014 : + |
| To GenomeBrowser | scaffold1537.1:70736..76014 |
| Genes list of scaffold | scaffold1537.1 |
| Synonym | pfu_aug1.0_5375.1_30948 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| integrase core domain protein | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1537.1_24985.t2 | 1 | 1 | rve | 566 | 674 | 9.4e-20 | 70.9 | 5.0e-23 | 2.5e-19 | 69.5 |
Transcript
| Transcript ID | pfu_aug2.0_1537.1_24985.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24985.t1 atgcgtctcataacaaaacagtcacgaccaaagaatcttaatgaagctgtctgcttagcagtagagcttgacgcatttaa taatgctgaaaagaaacgtgacggtacaggttgtgttagagctgctgaatgtcacaaagtgaccgatgtcagctccaaag atgtcctaaaactagtacagaacacgaataaagccctgtcagacatgagaaaagaaattcaggacttaagacagagtcaa aacagggacatcactgtaccgacgggacatcctcctgcctatcaaggtgtacctactcctgtctatcaagggctcgactt tatgaaaagtcacacttgttccatcgacatagtgaaaggcaatattgtcctagatggaaacactgtaaatcttatcatgg agggaaatattggctgctatcgtgtcttcctagatgagacactgaatctccctcaaatgtcagagatgtcattgacacat caactggtactttccctgaaaacgataacacacctaaccaaactattcgaggatacgtcaaagagactcagtcctgaaca atgcgatttgttgaagcagttcctactcaaacatcagaacttgtttgctaaagatgacattgatcttggcagagccgagt ctgtcaaacataagattgacacaggaggcacaactcctattaaacaagcccccaggagactttctgagcatatgcatgaa gaagttgataaacacatagaagccatgctcgtcaggaaagtcatccatccgtcagacagtccgtggtcatcacctattgt ccttgctaagaaaaaggacgggtcaactcttttttgtgttgactataggaaattaaatgaagtgacagtcaaggatgcat atccactgccactaattcaggaatccctagaccacttatccggagccaaatggttctcgacccttgatctctgtatgggt cgcctcgcccaagctggtctcaagcttaaggcaaagaaatgttctctatttgccaaagaagttgagtacctaggccatgt catttctgaatctgggacagccactagtaaagacaagatacaagtcataatcgactggcctgtgccaaagaatgtaactg agcatagacctggtaggcaacacaccaatgcagatgctttaagtaggctatcttgcaagcaatgtggctatcacacagac tgggacagtgagcatcctagatctgaacatgtgttaagcctctcatcatctctgttgccaatgcaagaagttcaatctaa tgataaagacttacaaaaagtcagatcgtggctagacaataagacccgaccagactccaaaaccattgacggtgagagct acttcctgaagtctctttacagtcaatttgaaaggctgtgcattattgacaatataatgtacagaagatgggacaacttt gaatcaaatgaagctatatatcaggcacttgttccactaattgagcggagaacaatcttgcagtactgtaatgacgaaag aactgctggacatctgggcattaaaaagactcttgataagataagaaagggatattactggcccaagttacagacagatg tccgtcagtatgtcacaggttgtgagttttgcacaaaaagaaagggcgaaaacaaaactaaacgagcgcccatgaaacta gtccaaacaggttaccccatggaacgtctagcattagatatccttggtgaactccctgtaacagacgctggtaataagta tatcctagtcatctcagactactttaccaagtggacagaaagctttcctatgccaaacatggaagctgcaacttgtgcta aaatcctggttgaacatgtgataagtagatttggcgtgccagcaactattcattcagatcagggcagtcaatttgaaagt gctctctttcaagaaatgtgtaaacttcttggaataaagaaaacacgcacactgtcatctgatgggatggtagagcgttt taaccgcacccttacatccatgcttagtgctttcgtgaatgaaaaccataacgactgggatgagcaacttcccttcgtta tgatggcatacaggtcatcagtgcacgagacgacatggtatacatcaaatgccctcaataggcagagaagtgtgcactcc actagatataatgtacgaaatgccatctcaggggatgattccaccagtggttccgttaggacggaaggacgattcagctc ttcgacgtctagcaaagcaaacgaatccgattggaatgatcaggacccggggactctcattgctgagaacgagagttcat ccagtgatagctcagactcttcggacgatgaaaccgggaatcctgatgagttaatggcaggacgtatcatacgtaaaccg tccactcccgagcctgtcttttctggcagagttgtggtcaagcgcacatctgaggacaaagtcagcgccgcgtcaaagaa acgtaaattgactgaggatgctgctcagattgcatgtgatgatcaagatgttatcatgcaatattcgtctctttcatgcg ttgctccagttaatatgcactccagttctagtcagtccacatcatcagtagatgttgcaacccagcatgaggttaccact agagacattggcgtacagtatgagaaatacaggaagagatctaaagagttgaagatgacaaaatacaatgagagaagaaa gactatcgaggttgtgtacgaggttgaagagttcttcaacatgtaa |
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| Transcript ID | pfu_aug2.0_1537.1_24985.t2 |
| Definition | - |
>pfu_aug2.0_1537.1_24985.t2 atgcgtctcataacaaaacagtcacgaccaaagaatcttaatgaagctgtctgcttagcagtagagcttgacgcatttaa taatgctgaaaagaaacgtgacggtacaggttgtgttagagctgctgaatgtcacaaagtgaccgatgtcagctccaaag atgtcctaaaactagtacagaacacgaataaagccctgtcagacatgagaaaagaaattcaggacttaagacagagtcaa aacagggacatcactgtaccgacgggacatcctcctgcctatcaaggtgtacctactcctgtctatcaagggctcgactt tatgaaaagtcacacttgttccatcgacatagtgaaaggcaatattgtcctagatggaaacactgtaaatcttatcatgg agggaaatattggctgctatcgtgtcttcctagatgagacactgaatctccctcaaatgtcagagatgtcattgacacat caactggtactttccctgaaaacgataacacacctaaccaaactattcgaggatacgtcaaagagactcagtcctgaaca atgcgatttgttgaagcagttcctactcaaacatcagaacttgtttgctaaagatgacattgatcttggcagagccgagt ctgtcaaacataagattgacacaggaggcacaactcctattaaacaagcccccaggagactttctgagcatatgcatgaa gaagttgataaacacatagaagccatgctcgtcaggaaagtcatccatccgtcagacagtccgtggtcatcacctattgt ccttgctaagaaaaaggacgggtcaactcttttttgtgttgactataggaaattaaatgaagtgacagtcaaggatgcat atccactgccactaattcaggaatccctagaccacttatccggagccaaatggttctcgacccttgatctctgtatgggt cgcctcgcccaagctggtctcaagcttaaggcaaagaaatgttctctatttgccaaagaagttgagtacctaggccatgt catttctgaatctgggacagccactagtaaagacaagatacaagtcataatcgactggcctgtgccaaagaatgtaactg agcatagacctggtaggcaacacaccaatgcagatgctttaagtaggctatcttgcaagcaatgtggctatcacacagac tgggacagtgagcatcctagatctgaacatgtgttaagcctctcatcatctctgttgccaatgcaagaagttcaatctaa tgataaagacttacaaaaagtcagatcgtggctagacaataagacccgaccagactccaaaaccattgacggtgagagct acttcctgaagtctctttacagtcaatttgaaaggctgtgcattattgacaatataatgtacagaagatgggacaacttt gaatcaaatgaagctatatatcaggcacttgttccactaattgagcggagaacaatcttgcagtactgtaatgacgaaag aactgctggacatctgggcattaaaaagactcttgataagataagaaagggatattactggcccaagttacagacagatg tccgtcagtatgtcacaggttgtgagttttgcacaaaaagaaagggcgaaaacaaaactaaacgagcgcccatgaaacta gtccaaacaggttaccccatggaacgtctagcattagatatccttggtgaactccctgtaacagacgctggtaataagta tatcctagtcatctcagactactttaccaagtggacagaaagctttcctatgccaaacatggaagctgcaacttgtgcta aaatcctggttgaacatgtgataagtagatttggcgtgccagcaactattcattcagatcagggcagtcaatttgaaagt gctctctttcaagaaatgtgtaaacttcttggaataaagaaaacacgcacactgtcatctgatgggatggtagagcgttt taaccgcacccttacatccatgcttagtgctttcgtgaatgaaaaccataacgactgggatgagcaacttcccttcgtta tgatggcatacaggtcatcagtgcacgagacgacatggtatacatcaaatgccctcaataggcagagaagtgtgcactcc actagatataatgctttgctaggtgagactgacgatatatcaccttcacaatcagactcagttaatgtagatgaaacgag tatttcaaagtctgacaatgacgaaccatgtgacttagataacgagagtgatgaacttgccgtaaatcctcctcatagac catttagaaatcgaagaccacctgtatacctcaaagattatgatactgagtattaa |
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Protein
| Protein ID | pfu_aug2.0_1537.1_24985.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24985.t1 MRLITKQSRPKNLNEAVCLAVELDAFNNAEKKRDGTGCVRAAECHKVTDVSSKDVLKLVQNTNKALSDMRKEIQDLRQSQ NRDITVPTGHPPAYQGVPTPVYQGLDFMKSHTCSIDIVKGNIVLDGNTVNLIMEGNIGCYRVFLDETLNLPQMSEMSLTH QLVLSLKTITHLTKLFEDTSKRLSPEQCDLLKQFLLKHQNLFAKDDIDLGRAESVKHKIDTGGTTPIKQAPRRLSEHMHE EVDKHIEAMLVRKVIHPSDSPWSSPIVLAKKKDGSTLFCVDYRKLNEVTVKDAYPLPLIQESLDHLSGAKWFSTLDLCMG RLAQAGLKLKAKKCSLFAKEVEYLGHVISESGTATSKDKIQVIIDWPVPKNVTEHRPGRQHTNADALSRLSCKQCGYHTD WDSEHPRSEHVLSLSSSLLPMQEVQSNDKDLQKVRSWLDNKTRPDSKTIDGESYFLKSLYSQFERLCIIDNIMYRRWDNF ESNEAIYQALVPLIERRTILQYCNDERTAGHLGIKKTLDKIRKGYYWPKLQTDVRQYVTGCEFCTKRKGENKTKRAPMKL VQTGYPMERLALDILGELPVTDAGNKYILVISDYFTKWTESFPMPNMEAATCAKILVEHVISRFGVPATIHSDQGSQFES ALFQEMCKLLGIKKTRTLSSDGMVERFNRTLTSMLSAFVNENHNDWDEQLPFVMMAYRSSVHETTWYTSNALNRQRSVHS TRYNVRNAISGDDSTSGSVRTEGRFSSSTSSKANESDWNDQDPGTLIAENESSSSDSSDSSDDETGNPDELMAGRIIRKP STPEPVFSGRVVVKRTSEDKVSAASKKRKLTEDAAQIACDDQDVIMQYSSLSCVAPVNMHSSSSQSTSSVDVATQHEVTT RDIGVQYEKYRKRSKELKMTKYNERRKTIEVVYEVEEFFNM |
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| Protein ID | pfu_aug2.0_1537.1_24985.t2 |
| Definition | - |
>pfu_aug2.0_1537.1_24985.t2 MRLITKQSRPKNLNEAVCLAVELDAFNNAEKKRDGTGCVRAAECHKVTDVSSKDVLKLVQNTNKALSDMRKEIQDLRQSQ NRDITVPTGHPPAYQGVPTPVYQGLDFMKSHTCSIDIVKGNIVLDGNTVNLIMEGNIGCYRVFLDETLNLPQMSEMSLTH QLVLSLKTITHLTKLFEDTSKRLSPEQCDLLKQFLLKHQNLFAKDDIDLGRAESVKHKIDTGGTTPIKQAPRRLSEHMHE EVDKHIEAMLVRKVIHPSDSPWSSPIVLAKKKDGSTLFCVDYRKLNEVTVKDAYPLPLIQESLDHLSGAKWFSTLDLCMG RLAQAGLKLKAKKCSLFAKEVEYLGHVISESGTATSKDKIQVIIDWPVPKNVTEHRPGRQHTNADALSRLSCKQCGYHTD WDSEHPRSEHVLSLSSSLLPMQEVQSNDKDLQKVRSWLDNKTRPDSKTIDGESYFLKSLYSQFERLCIIDNIMYRRWDNF ESNEAIYQALVPLIERRTILQYCNDERTAGHLGIKKTLDKIRKGYYWPKLQTDVRQYVTGCEFCTKRKGENKTKRAPMKL VQTGYPMERLALDILGELPVTDAGNKYILVISDYFTKWTESFPMPNMEAATCAKILVEHVISRFGVPATIHSDQGSQFES ALFQEMCKLLGIKKTRTLSSDGMVERFNRTLTSMLSAFVNENHNDWDEQLPFVMMAYRSSVHETTWYTSNALNRQRSVHS TRYNALLGETDDISPSQSDSVNVDETSISKSDNDEPCDLDNESDELAVNPPHRPFRNRRPPVYLKDYDTEY |
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