Gene
| Gene Model ID | pfu_aug2.0_1537.1_24987 |
|---|---|
| Locus | scaffold1537.1 : 116535 ... 133275 : - |
| To GenomeBrowser | scaffold1537.1:116535..133275 |
| Genes list of scaffold | scaffold1537.1 |
| Synonym | pfu_aug1.0_1847.1_51446 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cd109 antigen-like | GO:0048519 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1537.1_24987.t1 | 2 | 1 | VWA | 2 | 131 | 7.4e-19 | 68.1 | 5.4e-22 | 1.3e-18 | 67.3 |
| pfu_aug2.0_1537.1_24987.t1 | 1 | 1 | VWA_2 | 21 | 129 | 1.1e-06 | 28.8 | 8.4e-10 | 2.1e-06 | 27.9 |
| pfu_aug2.0_1537.1_24987.t1 | 2 | 1 | A2M_recep | 100 | 117 | 1.0e-20 | 73.6 | 1.1 | 2800.0 | -1.5 |
| pfu_aug2.0_1537.1_24987.t1 | 2 | 1 | A2M_comp | 147 | 223 | 7.9e-19 | 67.8 | 5.1e-22 | 1.3e-18 | 67.1 |
| pfu_aug2.0_1537.1_24987.t1 | 2 | 2 | VWA | 208 | 226 | 7.4e-19 | 68.1 | 0.89 | 2200.0 | -1.9 |
| pfu_aug2.0_1537.1_24987.t1 | 2 | 2 | A2M_comp | 262 | 292 | 7.9e-19 | 67.8 | 2.4 | 5900.0 | -3.8 |
| pfu_aug2.0_1537.1_24987.t1 | 2 | 2 | A2M_recep | 308 | 392 | 1.0e-20 | 73.6 | 1.7e-23 | 4.2e-20 | 71.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1537.1_24987.t1 | gi|676444374|ref|XP_009050408.1| | hypothetical protein LOTGIDRAFT_158717 [Lottia gigantea] | 5.0e-39 |
| pfu_aug2.0_1537.1_24987.t1 | gi|676444389|ref|XP_009050413.1| | hypothetical protein LOTGIDRAFT_231164 [Lottia gigantea] | 6.0e-38 |
| pfu_aug2.0_1537.1_24987.t1 | gi|704544309|ref|XP_010177674.1| | PREDICTED: CD109 antigen, partial [Mesitornis unicolor] | 9.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_1537.1_24987.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24987.t1 atggtaacatttggctctaaggattcattcgaaggcactcacgaagcgtttggactggaagattaccattccagtagaga catcattgatgctattggtcatgagccttttgataataatggaaggagcatcgcagacgcccttcgttacgtcagaaaga acagtttcgtatccaatcgaaattcttctaaacttgttattcttataacatatgggaactcagacaataggtatgctact gagagagaggcaaaagctttgaaaaatgcaggagttaagatattttctgttggtgttggatatagagttgacaaatcaga acttcagacaattgcatcaggaattaaccatgcaatcttcgtcagggattactcttcgctacaggaagtttacataccgc tctcgaaaggaaattgcaatttaaaagctaagatgccttggtcttcaagtatagaatactcaccaatctcttcgagtttt gcttattttccggcacactctttggatatcgagactgcctcttacatgatgttgtattacacaaagaacaaagagtattc aaagggacagaacatactgaaatggatactgaaacaaaggaatgtcaacggaggcttctcatctactcaggatactgttt tggccatccaagctatgtcagagttcgttcgagtaaccaacggaggaatgggaagtgcccaaaatgtaagcattgatgtc gatgccgattccgaatcacatcacttcaatgtgaatacaggcaatcgcttagtcctccagagctttcaagtttcagtcaa ctacaatgtcaaggaacaagtcgaaaagcccgtctttattttaaatgtaacgatcaccaatgaaacacttcatgcagtca caacaaagacatgcacaagctataacggaaccggcgtgggatcagggatgtctatcatagaacacggtgttttatctgga tttgaagtggacattgaagacgtcacagcaaatgtttatatcaaaaagatagaaagagacgacaaaatgatcaacatcta cttggatgagataactaccactccagcgtgtgtaacagtggtagcacagcgtacaacaatggtggccaaggtgaaggagg ctccagttagagtgtatgactattataaaccaggacaccaagtaactgctttctaccttccaaggactctgaaggacagc tcatactgtgatgtctgcaaggaatgcaagtgtccgacgaaatctctgggacattcaaacgtctga |
|
Protein
| Protein ID | pfu_aug2.0_1537.1_24987.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24987.t1 MVTFGSKDSFEGTHEAFGLEDYHSSRDIIDAIGHEPFDNNGRSIADALRYVRKNSFVSNRNSSKLVILITYGNSDNRYAT EREAKALKNAGVKIFSVGVGYRVDKSELQTIASGINHAIFVRDYSSLQEVYIPLSKGNCNLKAKMPWSSSIEYSPISSSF AYFPAHSLDIETASYMMLYYTKNKEYSKGQNILKWILKQRNVNGGFSSTQDTVLAIQAMSEFVRVTNGGMGSAQNVSIDV DADSESHHFNVNTGNRLVLQSFQVSVNYNVKEQVEKPVFILNVTITNETLHAVTTKTCTSYNGTGVGSGMSIIEHGVLSG FEVDIEDVTANVYIKKIERDDKMINIYLDEITTTPACVTVVAQRTTMVAKVKEAPVRVYDYYKPGHQVTAFYLPRTLKDS SYCDVCKECKCPTKSLGHSNV |
|