Gene
| Gene Model ID | pfu_aug2.0_1537.1_24991 |
|---|---|
| Locus | scaffold1537.1 : 219389 ... 239560 : - |
| To GenomeBrowser | scaffold1537.1:219389..239560 |
| Genes list of scaffold | scaffold1537.1 |
| Synonym | pfu_aug1.0_6558.1_09383 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1537.1_24991.t1 | 2 | 1 | Lectin_C | 12 | 95 | 9.0e-25 | 87.3 | 2.7e-09 | 2.0e-05 | 25.1 |
| pfu_aug2.0_1537.1_24991.t1 | 2 | 2 | Lectin_C | 293 | 400 | 9.0e-25 | 87.3 | 1.8e-21 | 1.3e-17 | 64.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1537.1_24991.t1 | gi|585696616|ref|XP_006822232.1| | PREDICTED: macrophage mannose receptor 1-like [Saccoglossus kowalevskii] | 1.0e-13 |
| pfu_aug2.0_1537.1_24991.t1 | gi|557006759|ref|XP_006004830.1| | PREDICTED: macrophage mannose receptor 1 [Latimeria chalumnae] | 1.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1537.1_24991.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24991.t1 atggaaggacttaaatcaaatggctttactggagaaggtatttggactggattgagcagacaaggaaattctaattaccg ttggacaggatcctcatcaatttatgttaactgggccaatggtcaaccttcatcttccaatggtcgccgctttcttctag actcgcctacacagatctatataccgagtatacggtccccgagggactgcggtatgctgaaatatactgactcgggtcgc tggtatagtctcagctgtggtaaaagttacccctacgtttgtgaatatggagctgtaagaaaagatcaaataacaacaaa gataatgacgacatcaaccatcaagacgaccactagaacaacaacacaaaaaccgacaacaacacacaaaccgacaacaa caccaaatccgacaacaacaccaaacccgacgacgacagaggctgacaaagaaggagagccgatctatgcaaagcataag atattttcaggaggagaatgtccatcctgtatcaatgctacggatataaccacatgcaccagagatacagttgtttgtcc acatggaagtcaggattgttacgtcaatacccatcacaggagtaactattgtcgctacagaccaataccctttcaaggtc atccagatgtcaaatgtaactactgctgtgacattagtgaacacaactgcttcaggaacattcttgatcagtttgtctca atatttaagacaacaacaacacgacaaccattcgtgtaccaacctggcgtccttgaccctgcagcggccttattctgtcc aaagcatctgaacaggacaaagacgttgatgtacaacacatacaccagacattgcttcactataaacatagcaaagaccg ccaactggtatgcagccaaatcttcttgtgaaagtcttggtggatacctagcccgaccccgggaatttagtgacaacatg tttattggattcagggctcgaggagcacttcattacaaatataaacatatctggattggactttctgacatagagaaaga gggtgactacagatggacaaatggggattctctcaattacacaaactggggatttagggagccgactggaactccatggc aaaactgtgtagcttacgatagagacactgataaatgggatgacaaagactgttacttaaagtatggttgggtatgccag tatgatcataatgctaagcctgtaacaactccaatccccacatcaaagtcctcaacgcatgcgtcaactacgccgcgcag taaacatacatttaaaccaaccactgttaagccagcgtcgacaactcctgttccaacaactgaaacgccctctaccacga aaccaagtacggtaactccttcgcctacctccgcttcaactactccttccagtactcctagagtctctactacacatact ccgtccaccacgcctttgtcctcaccgacaactcataagatacatgtaccaacgaccaggaaacctatcaccgggaccca cagatttcctggatatgaaataataggataa |
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Protein
| Protein ID | pfu_aug2.0_1537.1_24991.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1537.1_24991.t1 MEGLKSNGFTGEGIWTGLSRQGNSNYRWTGSSSIYVNWANGQPSSSNGRRFLLDSPTQIYIPSIRSPRDCGMLKYTDSGR WYSLSCGKSYPYVCEYGAVRKDQITTKIMTTSTIKTTTRTTTQKPTTTHKPTTTPNPTTTPNPTTTEADKEGEPIYAKHK IFSGGECPSCINATDITTCTRDTVVCPHGSQDCYVNTHHRSNYCRYRPIPFQGHPDVKCNYCCDISEHNCFRNILDQFVS IFKTTTTRQPFVYQPGVLDPAAALFCPKHLNRTKTLMYNTYTRHCFTINIAKTANWYAAKSSCESLGGYLARPREFSDNM FIGFRARGALHYKYKHIWIGLSDIEKEGDYRWTNGDSLNYTNWGFREPTGTPWQNCVAYDRDTDKWDDKDCYLKYGWVCQ YDHNAKPVTTPIPTSKSSTHASTTPRSKHTFKPTTVKPASTTPVPTTETPSTTKPSTVTPSPTSASTTPSSTPRVSTTHT PSTTPLSSPTTHKIHVPTTRKPITGTHRFPGYEIIG |
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