Gene
| Gene Model ID | pfu_aug2.0_15377.1_26495 |
|---|---|
| Locus | scaffold15377.1 : 1 ... 2361 : + |
| To GenomeBrowser | scaffold15377.1:1..2361 |
| Genes list of scaffold | scaffold15377.1 |
| Synonym | pfu_aug1.0_13252.1_03337 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tyrosine-protein kinase syk-like isoform x1 | GO:0000166 GO:0004713 GO:0006468 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15377.1_26495.t1 | 1 | 1 | Pkinase_Tyr | 1 | 84 | 7.6e-22 | 77.6 | 1.1e-25 | 8.3e-22 | 77.4 |
| pfu_aug2.0_15377.1_26495.t1 | 1 | 1 | Pkinase | 1 | 83 | 3.2e-12 | 46.1 | 4.7e-16 | 3.5e-12 | 46.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15377.1_26495.t1 | gi|675889190|ref|XP_009030097.1| | hypothetical protein HELRODRAFT_70092, partial [Helobdella robusta] | 3.0e-23 |
| pfu_aug2.0_15377.1_26495.t1 | gi|524884803|ref|XP_005099019.1| | PREDICTED: tyrosine-protein kinase SYK-like isoform X1 [Aplysia californica] | 3.0e-22 |
| pfu_aug2.0_15377.1_26495.t1 | gi|676458143|ref|XP_009054879.1| | hypothetical protein LOTGIDRAFT_118204 [Lottia gigantea] | 1.0e-21 |
| pfu_aug2.0_15377.1_26495.t1 | gi|156354432|ref|XP_001623398.1| | predicted protein [Nematostella vectensis] | 2.0e-21 |
| pfu_aug2.0_15377.1_26495.t1 | gi|557007456|ref|XP_006005041.1| | PREDICTED: LOW QUALITY PROTEIN: tyrosine-protein kinase SYK [Latimeria chalumnae] | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_15377.1_26495.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15377.1_26495.t1 ggtcgggacagtttggttcagtgaagaaaggggaatgtcgattacggagcggcaaaaaaattcctgttgccgttaaaaca cttaaaaatgaagatgtaacagcaaaggacgatatgatgaaggaagccaagtttatgatgaacttgtctcacaagcacat cgttcgtatgattggtatatgtgatgctgagtgtataatgctggtgttagagttatgtccaaaaggacccctcaactcat acttaaagcagaataa |
|
Protein
| Protein ID | pfu_aug2.0_15377.1_26495.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15377.1_26495.t1 SGQFGSVKKGECRLRSGKKIPVAVKTLKNEDVTAKDDMMKEAKFMMNLSHKHIVRMIGICDAECIMLVLELCPKGPLNSY LKQN |
|