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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1539.1_31741
Locus scaffold1539.1 : 16553 ... 31095 : -
To GenomeBrowser scaffold1539.1:16553..31095
Genes list of scaffold scaffold1539.1
Synonym pfu_aug1.0_2837.1_08438

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1539.1_31741.t1 1 1 Sulfotransfer_1 57 275 1.82169e-44 152.0 0.0 7.00649e-44 150.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1539.1_31741.t1 gi|471418398|ref|XP_004390696.1| 9.0e-37

Transcript
Transcript IDpfu_aug2.0_1539.1_31741.t1
Definition-
>pfu_aug2.0_1539.1_31741.t1
atgactttagagagttacttacgagaagggagattccaaaagaaatgtggagacgtagaattcgattttgtcactataga
tggcattggtttgtgtccattcgaaccagctcgagcaccaggaggctacataaagagacttaacgatattatgaaccttg
actcccgacctgatgatgtcataatggcaatatatcccaaatgtggaacccattggacttacgaaatcctgagcatgata
ttacaagaacaagcaaactataagaaggataccaaaatgagctctatgttggaagcactgcccaacctagagatgctgga
aaggctacaatcaccccgaattctaaacacacacctaccatacaagtggctgccaaggaagcatattcaaaatggtggaa
aaatcatatatactacgaggaatccaaaggacgcttacgtatcattctatcatcatatgaaaaatagttttgaattgggc
gaaaaatcaaacaatgtaacttgggaacagttctttgaaacctgcgtattagggaaagatgttgtttatggttcctggtt
tgattatgcaaaagaaatggaactagccaagaaaacgaatgaaaatatttacactgttcattatgagaacatgaaacagg
atcctgagacagaaatcaaagaaatagctgcctttcttggtgtacaattgccagactcattggttacggaaatagctgtc
aagtgtcatttcaagaatctgaagaaggcggagatagatgtcaaagagtatcctccagaaatggtgaaagctatggaaga
atttaagaaacggcatcctgaattcaaaatagacatacataggaaagaggtagcggacatatttatgcggcttgctgatt
ga

Protein
Protein IDpfu_aug2.0_1539.1_31741.t1
Definition-
>pfu_aug2.0_1539.1_31741.t1
MTLESYLREGRFQKKCGDVEFDFVTIDGIGLCPFEPARAPGGYIKRLNDIMNLDSRPDDVIMAIYPKCGTHWTYEILSMI
LQEQANYKKDTKMSSMLEALPNLEMLERLQSPRILNTHLPYKWLPRKHIQNGGKIIYTTRNPKDAYVSFYHHMKNSFELG
EKSNNVTWEQFFETCVLGKDVVYGSWFDYAKEMELAKKTNENIYTVHYENMKQDPETEIKEIAAFLGVQLPDSLVTEIAV
KCHFKNLKKAEIDVKEYPPEMVKAMEEFKKRHPEFKIDIHRKEVADIFMRLAD

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