Gene
| Gene Model ID | pfu_aug2.0_1539.1_31743 |
|---|---|
| Locus | scaffold1539.1 : 72346 ... 79160 : + |
| To GenomeBrowser | scaffold1539.1:72346..79160 |
| Genes list of scaffold | scaffold1539.1 |
| Synonym | pfu_aug1.0_6855.1_24094 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1539.1_31743.t1 | 2 | 1 | Thioredoxin | 18 | 106 | 6.2e-11 | 41.8 | 1.9e-14 | 1.4e-10 | 40.7 |
| pfu_aug2.0_1539.1_31743.t1 | 2 | 2 | Thioredoxin | 113 | 144 | 6.2e-11 | 41.8 | 0.26 | 1900.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1539.1_31743.t1 | gi|676488440|ref|XP_009064617.1| | hypothetical protein LOTGIDRAFT_204701 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1539.1_31743.t1 | gi|340729613|ref|XP_003403092.1| | PREDICTED: thioredoxin-related transmembrane protein 2 homolog [Bombus terrestris] | 0.0 |
| pfu_aug2.0_1539.1_31743.t1 | gi|755926807|ref|XP_011302231.1| | PREDICTED: thioredoxin-related transmembrane protein 2 homolog [Fopius arisanus] | 0.0 |
| pfu_aug2.0_1539.1_31743.t1 | gi|350411278|ref|XP_003489295.1| | PREDICTED: thioredoxin-related transmembrane protein 2 homolog [Bombus impatiens] | 0.0 |
| pfu_aug2.0_1539.1_31743.t1 | gi|524899717|ref|XP_005106287.1| | PREDICTED: thioredoxin-related transmembrane protein 2-B-like isoform X1 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1539.1_31743.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1539.1_31743.t1 atgatatttttaccaaagccaggctacaaaggacctgaattcatcacatactttagggaatctaatttacaggaggagtt agagcgtgacaagaggatagtttgggtcgtttgtttctacgcagcctggtctccacaatgcgtcaattttgctcctattt tctcagaaatctcctctgaatatcatttggataatttacagtttggtaaaatagatatatcaagatacccagaggctggc aaacactttaatgtagacagtagttcatggtccaagcagcttccatctgttatattgttcaaagatggaaaagaggatca taggaagcctttcatatcaccaaaaggaacagttgtaagacataaatttcataagcaaggaatgatacaggactttgatc tgaacaaccattatcaaacatgcaagaagtatccactgaagacaagaaaagacaaggacaaagaaaagaaagaaaactaa |
|
Protein
| Protein ID | pfu_aug2.0_1539.1_31743.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1539.1_31743.t1 MIFLPKPGYKGPEFITYFRESNLQEELERDKRIVWVVCFYAAWSPQCVNFAPIFSEISSEYHLDNLQFGKIDISRYPEAG KHFNVDSSSWSKQLPSVILFKDGKEDHRKPFISPKGTVVRHKFHKQGMIQDFDLNNHYQTCKKYPLKTRKDKDKEKKEN |
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