Gene
| Gene Model ID | pfu_aug2.0_1539.1_31747 |
|---|---|
| Locus | scaffold1539.1 : 125816 ... 135792 : + |
| To GenomeBrowser | scaffold1539.1:125816..135792 |
| Genes list of scaffold | scaffold1539.1 |
| Synonym | pfu_aug1.0_4550.1_59539 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1539.1_31747.t1 | 1 | 1 | XRCC1_N | 8 | 144 | 2.5e-23 | 82.2 | 3.0e-27 | 4.4e-23 | 81.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1539.1_31747.t1 | gi|524913210|ref|XP_005111437.1| | PREDICTED: uncharacterized protein DDB_G0284459-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1539.1_31747.t1 | gi|524913208|ref|XP_005111436.1| | PREDICTED: uncharacterized protein DDB_G0284459-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1539.1_31747.t1 | gi|676436252|ref|XP_009047821.1| | hypothetical protein LOTGIDRAFT_139677 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1539.1_31747.t1 | gi|676483933|ref|XP_009063182.1| | hypothetical protein LOTGIDRAFT_59017, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1539.1_31747.t1 | gi|585649298|ref|XP_006814363.1| | PREDICTED: uncharacterized protein LOC100373256 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1539.1_31747.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1539.1_31747.t1 atgaaaaaagtggtattaggcgaggatgaagtacacaaagtcaataacctgatacgcagtgacggtacaaagaaatggct gacacattctaaagatagatctggacaagcggaagctgtgttccagctagagggcccctctgtcatctcatatattgata taggttcaatatggtcagctatggtagagatccaggttggatgttcagactggccacaggataaaccttaccaaacactc ctccctacgtgtagtcttatgactccagctgattgtagactaggacagaactttataaagacaagaatgtttggaacaaa tgacttctcagaagaaaatgccttcaaggaatgggaccgtctcaaaattatactacgacagcctttcaaaagagaagctc agtttggcctttcctttcttcatctcaagtctaccatcaagaccccgtcctctgtcagcaagacacaaagtggaaaatct gtaaaagcaatacaaaaacatttcttcggaaaatcagctaacagctctaaggaggatcagttaaagacaaagttactaaa aatagccgggtcttctgagaatggctcagaacatgaagaatctctcaccagaacagccaagcttgtattagctggaagca cgtctggcaataaaatgacagggaaaaaacaggaggtagatggtcaaaaaccagcattatactctagtcacatggcacag aagtatggtccccagtttgacgaggaagtacaagaatttctgaaaacactgacccttgtggaagaagaacttgatagaat aactatggcagacctgaggcatagatttgagaggaaaaagaagaggaagttaactctggaagaaaagaaaacttttgtca aattagcaagggatcatttgaattcaatttttggggaagagggtggggaagagatatcttctaaatcgaaacacatcaat ctcaaaactgatcaaaatagtgggaaaccagtactccagaacaatgatgaaaaatcatcaaataaaactgatagagatat gacttctgtgtgtgaaaaaacaaatgctaaaccagaaaataatgttccaggaaaatcgcctctttcattcaagaagtcaa ctccacttgcccaagttaaacatggggatcatagggcaaattcacctggttcatcaccaaagccttttatggagaaactt gtgaagaaccttggttttagtcccacggttaaaaaaccatcagctaagngaaagtgtgggtag |
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Protein
| Protein ID | pfu_aug2.0_1539.1_31747.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1539.1_31747.t1 MKKVVLGEDEVHKVNNLIRSDGTKKWLTHSKDRSGQAEAVFQLEGPSVISYIDIGSIWSAMVEIQVGCSDWPQDKPYQTL LPTCSLMTPADCRLGQNFIKTRMFGTNDFSEENAFKEWDRLKIILRQPFKREAQFGLSFLHLKSTIKTPSSVSKTQSGKS VKAIQKHFFGKSANSSKEDQLKTKLLKIAGSSENGSEHEESLTRTAKLVLAGSTSGNKMTGKKQEVDGQKPALYSSHMAQ KYGPQFDEEVQEFLKTLTLVEEELDRITMADLRHRFERKKKRKLTLEEKKTFVKLARDHLNSIFGEEGGEEISSKSKHIN LKTDQNSGKPVLQNNDEKSSNKTDRDMTSVCEKTNAKPENNVPGKSPLSFKKSTPLAQVKHGDHRANSPGSSPKPFMEKL VKNLGFSPTVKKPSAKXKCG |
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