Gene
| Gene Model ID | pfu_aug2.0_154.1_13684 |
|---|---|
| Locus | scaffold154.1 : 52136 ... 65951 : + |
| To GenomeBrowser | scaffold154.1:52136..65951 |
| Genes list of scaffold | scaffold154.1 |
| Synonym | pfu_aug1.0_114195.1_13710 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_154.1_13684.t1 | 4 | 1 | EF-hand_8 | 4 | 33 | 6.1e-08 | 32.1 | 0.19 | 400.0 | 0.7 |
| pfu_aug2.0_154.1_13684.t1 | 4 | 1 | EF-hand_6 | 46 | 58 | 2.3e-10 | 39.4 | 0.77 | 1600.0 | -0.6 |
| pfu_aug2.0_154.1_13684.t1 | 4 | 2 | EF-hand_8 | 46 | 89 | 6.1e-08 | 32.1 | 2.7e-07 | 0.00058 | 19.4 |
| pfu_aug2.0_154.1_13684.t1 | 3 | 1 | EF-hand_1 | 68 | 92 | 2.1e-13 | 48.5 | 7.9e-07 | 0.0017 | 17.5 |
| pfu_aug2.0_154.1_13684.t1 | 4 | 2 | EF-hand_6 | 68 | 92 | 2.3e-10 | 39.4 | 2.0e-05 | 0.041 | 13.7 |
| pfu_aug2.0_154.1_13684.t1 | 3 | 1 | EF-hand_5 | 68 | 88 | 1.7e-09 | 36.5 | 3.5e-06 | 0.0074 | 15.5 |
| pfu_aug2.0_154.1_13684.t1 | 2 | 1 | EF-hand_7 | 69 | 127 | 2.6e-18 | 65.8 | 3.8e-13 | 8.0e-10 | 38.7 |
| pfu_aug2.0_154.1_13684.t1 | 4 | 3 | EF-hand_8 | 101 | 129 | 6.1e-08 | 32.1 | 0.016 | 33.0 | 4.1 |
| pfu_aug2.0_154.1_13684.t1 | 3 | 2 | EF-hand_1 | 105 | 130 | 2.1e-13 | 48.5 | 1.9e-06 | 0.0041 | 16.3 |
| pfu_aug2.0_154.1_13684.t1 | 4 | 3 | EF-hand_6 | 106 | 129 | 2.3e-10 | 39.4 | 1.6e-05 | 0.033 | 14.0 |
| pfu_aug2.0_154.1_13684.t1 | 2 | 2 | EF-hand_7 | 107 | 170 | 2.6e-18 | 65.8 | 3.8e-13 | 8.0e-10 | 38.7 |
| pfu_aug2.0_154.1_13684.t1 | 3 | 2 | EF-hand_5 | 108 | 124 | 1.7e-09 | 36.5 | 2.8e-05 | 0.06 | 12.7 |
| pfu_aug2.0_154.1_13684.t1 | 4 | 4 | EF-hand_8 | 147 | 173 | 6.1e-08 | 32.1 | 1.5e-05 | 0.032 | 13.8 |
| pfu_aug2.0_154.1_13684.t1 | 3 | 3 | EF-hand_1 | 152 | 173 | 2.1e-13 | 48.5 | 4.8e-05 | 0.1 | 11.9 |
| pfu_aug2.0_154.1_13684.t1 | 3 | 3 | EF-hand_5 | 152 | 170 | 1.7e-09 | 36.5 | 0.016 | 33.0 | 4.0 |
| pfu_aug2.0_154.1_13684.t1 | 4 | 4 | EF-hand_6 | 154 | 170 | 2.3e-10 | 39.4 | 0.0037 | 7.9 | 6.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_154.1_13684.t1 | gi|260811954|ref|XP_002600686.1| | hypothetical protein BRAFLDRAFT_118548 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_154.1_13684.t1 | gi|291243081|ref|XP_002741434.1| | PREDICTED: EF-hand calcium-binding domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_154.1_13684.t1 | gi|505843741|ref|XP_004615367.1| | PREDICTED: EF-hand calcium-binding domain-containing protein 1 isoform X1 [Sorex araneus] | 0.0 |
| pfu_aug2.0_154.1_13684.t1 | gi|149420083|ref|XP_001520613.1| | PREDICTED: EF-hand calcium-binding domain-containing protein 1 [Ornithorhynchus anatinus] | 0.0 |
| pfu_aug2.0_154.1_13684.t1 | gi|573896966|ref|XP_006636221.1| | PREDICTED: EF-hand calcium-binding domain-containing protein 1-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_154.1_13684.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13684.t1 atgtcgaatataaagagacaagaactgactaaactaacagagaaattaatgaaaagaaaagaatgtcattttcagaagca cgaagtagagaggttgattattatgttctgtaagcttaccggtggctgccatgagaagttagacagagcaaagttcaggg atattttacacaagtgcttctgtatgacagatgatatgctgatggatagagttttcaggtcgtttgatacagacacagat aactatctttcacacgaggaatgggttattggcctttctataatgctacacggcacatatgaggaaaaatgcaacttttg tttcgtggcgtatgacttgaacagcgatggttggatatcacgtgaagaaatgttccaattactgaaaaattctatattaa aacaagtatcagaggaggatcaggatgagaatatcaaagagttggtggagattgttctcaagaaaatggaccgtgatcat gatagtcgtttgagcttacaagattttaagggaactgtcaaagaagagccactgttgttagaagtgctaggcccgtgtct tcccaataaacctctgcaagatgcctttttagaggagctaggaagagaaaccgcaaagtattaa |
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Protein
| Protein ID | pfu_aug2.0_154.1_13684.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13684.t1 MSNIKRQELTKLTEKLMKRKECHFQKHEVERLIIMFCKLTGGCHEKLDRAKFRDILHKCFCMTDDMLMDRVFRSFDTDTD NYLSHEEWVIGLSIMLHGTYEEKCNFCFVAYDLNSDGWISREEMFQLLKNSILKQVSEEDQDENIKELVEIVLKKMDRDH DSRLSLQDFKGTVKEEPLLLEVLGPCLPNKPLQDAFLEELGRETAKY |
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