Gene
| Gene Model ID | pfu_aug2.0_154.1_13686 |
|---|---|
| Locus | scaffold154.1 : 81966 ... 133844 : + |
| To GenomeBrowser | scaffold154.1:81966..133844 |
| Genes list of scaffold | scaffold154.1 |
| Synonym | pfu_aug1.0_50861.1_70710 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| leukocyte tyrosine kinase receptor | GO:0016310 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_154.1_13686.t1 | 2 | 1 | Pkinase | 610 | 736 | 1.5e-28 | 99.7 | 1.6e-19 | 4.8e-16 | 58.6 |
| pfu_aug2.0_154.1_13686.t1 | 2 | 1 | Pkinase_Tyr | 611 | 736 | 0.0 | 210.1 | 4.0e-31 | 1.2e-27 | 96.6 |
| pfu_aug2.0_154.1_13686.t1 | 2 | 2 | Pkinase_Tyr | 738 | 840 | 0.0 | 210.1 | 7.8e-36 | 2.3e-32 | 112.0 |
| pfu_aug2.0_154.1_13686.t1 | 2 | 2 | Pkinase | 751 | 839 | 1.5e-28 | 99.7 | 2.0e-13 | 5.8e-10 | 38.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_154.1_13686.t1 | gi|556994413|ref|XP_006001202.1| | PREDICTED: ALK tyrosine kinase receptor-like [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_154.1_13686.t1 | gi|512862123|ref|XP_002933782.2| | PREDICTED: leukocyte tyrosine kinase receptor [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_154.1_13686.t1 | gi|641766713|ref|XP_008168163.1| | PREDICTED: leukocyte tyrosine kinase receptor isoform X4 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_154.1_13686.t1 | gi|641766707|ref|XP_008168160.1| | PREDICTED: leukocyte tyrosine kinase receptor isoform X1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_154.1_13686.t1 | gi|641766709|ref|XP_008168161.1| | PREDICTED: leukocyte tyrosine kinase receptor isoform X2 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_154.1_13686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13686.t1 atgctgcaaaagagtagaaagataagtgtagagagtgcagcattgattctcttttcctgtgcttgcagatttactatttc ggatgatcttcgtattaacctttcagaatttgagtacagaaacggaaacgatgtcacaagttcatcactgaagatcgttc taccatctgacacactgaggtccctttatggtttttctgttacggaaggtcacttagaatggaagactaaatgtggacac aatcattctgtaacaggtgtattaaggcagcttaatattaatgagaaatgtggacctgtatttcaatttatggatgtaaa catttcttcagtgttggacatctcgactacggaatgcatagaaagaagttacaaacattcgttgtttgactccaaaacaa cagacatcaatatcgtcaaagatgattgtgtcaatagggagtctgaagaaaacttgatctttactttattcgtaaaaaat catgatgttccagaaaaccaaaggggaatttatgtgagtgaatttgttctacacctgaaattatcggaaattcctagcga tggtcaatcgaattcagttgtgcaatcaccgatgatgtttggtggcagtgaatcatgctccctagtaatagtaaggatag acgacaagaaacacctagttgtgccagaactgattcttctaacctatgtaaataatacattggagccaactgcaaatata tcatccgatgtagcttataaggaaagcaagtggacatttatttcctataaaattggaacaaagaaggagccatttgcagt tcagcttcacggtgatgtttgtgaagcaaatatttccatgtcgggttgtaaagagtttcatggcgaatttgcaaaattcg gatgtaaacggaatggtcattgttcatggttttataacaaggaaatctctggaaattacagcgtttgtggcgaggataac ttatacacatgcaagtccggggtgtgtatcgataaagaagccgaatgtgatctggttaaggactgcctagatggtgatga tgaggaaacagccctttgttctgacagagtgtcggagtggaattgtgacttcgaaaattttaacaacagtggagggaagt gccattttcttcttctcgcaaatcgaaattttataaacggagattctgggaaatgtaaccttaaagtaaggacagccaaa gagacgaggatcggaaatgatcataccctaaaccttgggactggtcatttcctgcatttggataaaactccagataactg tggtatcggccttgcagaagattctgtcttcactaatattctacaacctggaaatttcgtaatgaagcgtccagccaaat gtgaggtaactgtgtcagtggcagcagcctttttagattccagtggattaatgatatgggggatcaatatttgtgatatt aatttcaagtcatgtcatgaagttcagaaattcgatttgacagaaaaatcatggaaaacctacaacgtaaagatcccttc acaaaatacaaggattgtcagtagtcatttcctgcatttggataaaactccagataactgtggtatcggccttgcagaag attctgtcttcactaatattctacaacctggaaatttcgtaatgaagcgtccagccaaatgtgaggtaactgtgtcagtg gcagcagcctttttagattccagtggattaatgatatgggggatcaatatttgtgatattaatttcaagtcatgtcatga agttcacaaattcgatttgacagagaaatcatggaaaacctacaacgtaaagatcccttcacaaaatacaagtcttctgg gaggagggcagtttggagaagtgtacaaagggatgctgatcagagattcctcacagaggaaagatcaaatagtagcaata aagaaattacttccaacttcttccgaagacagcaggacagaatttattcttgaagcattcacgctaagtaaattcaaaca tagaaacatagttaagtgcataggagtttctctgaatggttctgaaattctgatggtccaagaatacttgtcaggcggtg atctcaaggaatatttactggagtcaagaaaccaaaagacaacccttttattggatatccaacttagcctagcattagac atagcaagtgcagggcagtatcttgagcaaaacaatttcatacatcgtacttcttgctatgtaaaatctggacaaggaat gcttccacttcgatggatgccaccagaagcgtttattgatggtgtgtactctacaaaatctgatgtctggtcatacggag tactactgtgggagatattaagttatggagaacatccctactcaggctggtcaaatcttgaagtccaacgaaatgtatca tctggtcaaagactggagtacccatctaaatgtcctcttaaattatgcagcttactgaggatgtgctgggaaacggaccc ttgtaacagacccagctttatttctatctgccagcagcttacaacgataaagagctcaagtcaagaggagcgatgtgaag tgacgtacacagccatacaaagtaacaaagaaggacaatcacgtctatgttacagtggtgaagaaagtatactatga |
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Protein
| Protein ID | pfu_aug2.0_154.1_13686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13686.t1 MLQKSRKISVESAALILFSCACRFTISDDLRINLSEFEYRNGNDVTSSSLKIVLPSDTLRSLYGFSVTEGHLEWKTKCGH NHSVTGVLRQLNINEKCGPVFQFMDVNISSVLDISTTECIERSYKHSLFDSKTTDINIVKDDCVNRESEENLIFTLFVKN HDVPENQRGIYVSEFVLHLKLSEIPSDGQSNSVVQSPMMFGGSESCSLVIVRIDDKKHLVVPELILLTYVNNTLEPTANI SSDVAYKESKWTFISYKIGTKKEPFAVQLHGDVCEANISMSGCKEFHGEFAKFGCKRNGHCSWFYNKEISGNYSVCGEDN LYTCKSGVCIDKEAECDLVKDCLDGDDEETALCSDRVSEWNCDFENFNNSGGKCHFLLLANRNFINGDSGKCNLKVRTAK ETRIGNDHTLNLGTGHFLHLDKTPDNCGIGLAEDSVFTNILQPGNFVMKRPAKCEVTVSVAAAFLDSSGLMIWGINICDI NFKSCHEVQKFDLTEKSWKTYNVKIPSQNTRIVSSHFLHLDKTPDNCGIGLAEDSVFTNILQPGNFVMKRPAKCEVTVSV AAAFLDSSGLMIWGINICDINFKSCHEVHKFDLTEKSWKTYNVKIPSQNTSLLGGGQFGEVYKGMLIRDSSQRKDQIVAI KKLLPTSSEDSRTEFILEAFTLSKFKHRNIVKCIGVSLNGSEILMVQEYLSGGDLKEYLLESRNQKTTLLLDIQLSLALD IASAGQYLEQNNFIHRTSCYVKSGQGMLPLRWMPPEAFIDGVYSTKSDVWSYGVLLWEILSYGEHPYSGWSNLEVQRNVS SGQRLEYPSKCPLKLCSLLRMCWETDPCNRPSFISICQQLTTIKSSSQEERCEVTYTAIQSNKEGQSRLCYSGEESIL |
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