Gene
| Gene Model ID | pfu_aug2.0_154.1_13687 |
|---|---|
| Locus | scaffold154.1 : 141450 ... 147605 : - |
| To GenomeBrowser | scaffold154.1:141450..147605 |
| Genes list of scaffold | scaffold154.1 |
| Synonym | pfu_aug1.0_17436.1_47100 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_154.1_13687.t1 | 2 | 1 | zf-B_box | 38 | 83 | 5.0e-08 | 32.7 | 4.6e-07 | 0.0017 | 18.1 |
| pfu_aug2.0_154.1_13687.t1 | 2 | 2 | zf-B_box | 102 | 133 | 5.0e-08 | 32.7 | 1.4e-07 | 0.00051 | 19.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_154.1_13687.t1 | gi|260815581|ref|XP_002602551.1| | hypothetical protein BRAFLDRAFT_93856 [Branchiostoma floridae] | 1.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_154.1_13687.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13687.t1 atgtatctagttccgtttccggaaaagccaaggaacaaatgggcaacgcagtttccgacggacagtttggtgacatcact cgccgatagtgcttctttgaaaacggactcccaaacatgcgctccttgcaaacgggaaggtaaacattcagaggcaaaat tctggtgtcgggactgttttgaggccatgtgcgactcctgtaagctaatccataagaagatccgacagatcaaatcccat aaaattctacgtcttgaagaagttcgctctagtccacaaatactaaagatggtagaaggcaacgtcgactgcacgcaaca caccaaacgacagatcgagctcttctgtcgacagcaccggaagctatgttgtgtcgtctgctttgcaaccgaccacagag aatgccctgatgtgaagacgattgacgaacttgtaaaggatgaaaaaagtgaaggcgaacttacagagattatagaggct atgaaagaagtgatgaacagggcagaagaacaaataagtcataaaactcaaactctgactctgatgacttttaaacacga ggaacttgcagaaaaaatagaatcgatcactagaaaggccatagagagactgaaatcactgcgcaacgaggcgatagaaa aatttgaaatttgtcactcaaaagaaacaaaacgcattgaatatcaacgcgatattctgcaaagttctaaacttgcgatg aaaatggacttgaaatacttagaagcagtaacaaagcatggatcgccgaaacaagtgttcattacgtcagagaaaattcg acatcaagtcggatttcatcgtgaaattctaacggtagatcaagaaaatcacgaggatgtggactacaaattcgaattta atgaaattgtagaagatctttctcataaactatctgctttagggaaactcaaagttttgcgaaactctttggatgaaatg gtccaggacaacgatagagagactgggatgaaatccgtgacctttagtatagctccaaatcaggcaccgactcgcttgtc agtcaagacatacagcactgctactccatcatcgagaccacaaactctggaaaactgcgaagcctctcgcataagaatga gaaaggaaaaagattacgatggatcgatgggaagcgaccgcaaaatctcatggtttacgggtggggttttctgtcttgac aacggccagtttataatggcggactacaataaccacaagctcaaacggttcaaaagggacgtgtacagtcccatcatgga atacccagtagaatccgccccttgtgacatagcacttgtacaggacgacgaaattcttgtttcgtttccccacgaatgtc gtatcaatcggtacaagctaagagacgacgatatcctcaaacaaacggacaccattactacgttatcgcctccagagggc gtagccttcgtcgatcagaatatcatagcctcgttttcagattgcatcaagatcatggacgaatatggaaaggaagtggt aaacataccaacgaaggaaagctccgcttacaccattcctattgtagcctccaagaccggcaataccttcgtgcatcgtg acgggaacgccattgtgatcagatctctggacggagatgaaatatttagatttcggcatcggcaactaaaggaaccaagt ggaataagtatggacttcaaagacaacatttatgtctgtgattgcaactcgagcaacatctaccagatatccgcggatgg tcagcgtgggcgaatcatacggtcctcgcgactttgcgtgggcagccccgtaggaataggctttgacggaaccggaaaac gattgtggcttacatccaatatacaacgatctggacaactgctgaccatgtatacactgtcatgctaa |
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Protein
| Protein ID | pfu_aug2.0_154.1_13687.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13687.t1 MYLVPFPEKPRNKWATQFPTDSLVTSLADSASLKTDSQTCAPCKREGKHSEAKFWCRDCFEAMCDSCKLIHKKIRQIKSH KILRLEEVRSSPQILKMVEGNVDCTQHTKRQIELFCRQHRKLCCVVCFATDHRECPDVKTIDELVKDEKSEGELTEIIEA MKEVMNRAEEQISHKTQTLTLMTFKHEELAEKIESITRKAIERLKSLRNEAIEKFEICHSKETKRIEYQRDILQSSKLAM KMDLKYLEAVTKHGSPKQVFITSEKIRHQVGFHREILTVDQENHEDVDYKFEFNEIVEDLSHKLSALGKLKVLRNSLDEM VQDNDRETGMKSVTFSIAPNQAPTRLSVKTYSTATPSSRPQTLENCEASRIRMRKEKDYDGSMGSDRKISWFTGGVFCLD NGQFIMADYNNHKLKRFKRDVYSPIMEYPVESAPCDIALVQDDEILVSFPHECRINRYKLRDDDILKQTDTITTLSPPEG VAFVDQNIIASFSDCIKIMDEYGKEVVNIPTKESSAYTIPIVASKTGNTFVHRDGNAIVIRSLDGDEIFRFRHRQLKEPS GISMDFKDNIYVCDCNSSNIYQISADGQRGRIIRSSRLCVGSPVGIGFDGTGKRLWLTSNIQRSGQLLTMYTLSC |
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