Gene
| Gene Model ID | pfu_aug2.0_154.1_13692 |
|---|---|
| Locus | scaffold154.1 : 196633 ... 219269 : + |
| To GenomeBrowser | scaffold154.1:196633..219269 |
| Genes list of scaffold | scaffold154.1 |
| Synonym | pfu_aug1.0_223695.1_57516 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_154.1_13692.t1 | 2 | 1 | HECT | 217 | 369 | 5.2e-13 | 48.8 | 4.1e-06 | 0.02 | 14.0 |
| pfu_aug2.0_154.1_13692.t1 | 2 | 2 | HECT | 396 | 469 | 5.2e-13 | 48.8 | 9.6e-12 | 4.7e-08 | 32.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_154.1_13692.t1 | gi|736196392|ref|XP_010772876.1| | PREDICTED: uncharacterized protein LOC104948381 isoform X2 [Notothenia coriiceps] | 4.0e-32 |
| pfu_aug2.0_154.1_13692.t1 | gi|736196388|ref|XP_010772875.1| | PREDICTED: uncharacterized protein LOC104948381 isoform X1 [Notothenia coriiceps] | 5.0e-32 |
| pfu_aug2.0_154.1_13692.t1 | gi|585661992|ref|XP_006816668.1| | PREDICTED: uncharacterized protein LOC100367875 [Saccoglossus kowalevskii] | 1.0e-31 |
| pfu_aug2.0_154.1_13692.t1 | gi|734604441|ref|XP_010729275.1| | PREDICTED: uncharacterized protein LOC104919058 [Larimichthys crocea] | 1.0e-31 |
| pfu_aug2.0_154.1_13692.t1 | gi|597797276|ref|XP_007260209.1| | PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase-like isoform X2 [Astyanax mexicanus] | 6.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_154.1_13692.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13692.t1 atgggacgaatttgcaatagggcgacacgtcgtgtgtccttcaacaacaatatggccgacctagcgaactctagcgaaac agacgatgatgaacgcgttcgaaaggcattaggagctgcatgtcacatgctaagaagtgctgatccatacagcatatctt tacttaaactcattcattgcgatggtcgttccggatatggcgttgcatttacgtcgtcttcggttcaagtacaatacgtt gtctcttcagatggactcgtaccagtgtttgcattcacagaaatatttgcgacggggtatgatatgttactaagttacat aaaggtaggagagaagccgaaggatcaagaaaaactccgagtattccaaaaactgacagcattcctgtcaaacataaaag agtgtcttgcccctcaatgcggagagcagaggcggattcaaaggagtgttacaccagatactggatcagatgctagagga agagatagtgttacaccagatactggatcaagttcaaccagctctcattgtttggatttcatcgaggttgttgacagtga agacgaggagctggagagggcaatacaagccagtattatggaggtagagaacacacagctcgctatgaaggagcttgcta tgtcaacaatgtttgagggaaaaagtggaagtaggattttttctcacaatatcaaattgttggaggaaaacaagtattgt attgctgggcgtttggttgcactgtcatttgcccaggaaggcccagggcctcatttttttaatggtactctctatgattt gatgactgagaccaaacaagaacaaggagcttcaattgaaaagatacaggatgttctgccttttaatgttcaggaaattc ttaaacagctcctagacatgcagtctgagacagacagagagaaatttttggttgaccatggagagtggctaacagaacag ggtattcccaatatttggagactggcaattgtgaaaaaaatggaaatggctgatttaataattaagcagtttgtatacta cagaactgcagctgaaatctcacaatttgtaaatggaatggaatctgtttccaacttctggtctcttgtgaaaagcaatc ctgccattttcaaggcactattctgctacactgtggagccactgaatggcaacattcctgttacatttgaggagctcctt gcattcatcactggtgctgacaaagtaccaccttgtggtttttcaaaggcaatcgacatttccttttatccagttgaaca tggagtttacagattacctcatgtttcgacttgttcgttagaattgcacttgccaagaggaattgatgatatcaaggctt tccaggaacttatgattagagcactgaaagagtctatgggttttgagaagatataa |
|
Protein
| Protein ID | pfu_aug2.0_154.1_13692.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13692.t1 MGRICNRATRRVSFNNNMADLANSSETDDDERVRKALGAACHMLRSADPYSISLLKLIHCDGRSGYGVAFTSSSVQVQYV VSSDGLVPVFAFTEIFATGYDMLLSYIKVGEKPKDQEKLRVFQKLTAFLSNIKECLAPQCGEQRRIQRSVTPDTGSDARG RDSVTPDTGSSSTSSHCLDFIEVVDSEDEELERAIQASIMEVENTQLAMKELAMSTMFEGKSGSRIFSHNIKLLEENKYC IAGRLVALSFAQEGPGPHFFNGTLYDLMTETKQEQGASIEKIQDVLPFNVQEILKQLLDMQSETDREKFLVDHGEWLTEQ GIPNIWRLAIVKKMEMADLIIKQFVYYRTAAEISQFVNGMESVSNFWSLVKSNPAIFKALFCYTVEPLNGNIPVTFEELL AFITGADKVPPCGFSKAIDISFYPVEHGVYRLPHVSTCSLELHLPRGIDDIKAFQELMIRALKESMGFEKI |
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