Gene
| Gene Model ID | pfu_aug2.0_154.1_13697 |
|---|---|
| Locus | scaffold154.1 : 307486 ... 322532 : - |
| To GenomeBrowser | scaffold154.1:307486..322532 |
| Genes list of scaffold | scaffold154.1 |
| Synonym | pfu_aug1.0_6887.1_60145 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein aatf | GO:0005515 GO:0005634 GO:0005737 GO:0031324 GO:0043232 GO:0044446 GO:0044763 GO:0080090 GO:2000112 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_154.1_13697.t1 | 3 | 1 | AATF-Che1 | 57 | 84 | 5.8e-27 | 94.4 | 0.15 | 2200.0 | -1.3 |
| pfu_aug2.0_154.1_13697.t1 | 3 | 2 | AATF-Che1 | 139 | 159 | 5.8e-27 | 94.4 | 0.22 | 3300.0 | -1.9 |
| pfu_aug2.0_154.1_13697.t1 | 3 | 3 | AATF-Che1 | 199 | 367 | 5.8e-27 | 94.4 | 3.9e-31 | 5.8e-27 | 94.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_154.1_13697.t1 | gi|697039553|ref|XP_009582307.1| | PREDICTED: protein AATF [Fulmarus glacialis] | 0.0 |
| pfu_aug2.0_154.1_13697.t1 | gi|698453002|ref|XP_009701374.1| | PREDICTED: protein AATF, partial [Cariama cristata] | 0.0 |
| pfu_aug2.0_154.1_13697.t1 | gi|686600743|ref|XP_009276629.1| | PREDICTED: protein AATF [Aptenodytes forsteri] | 0.0 |
| pfu_aug2.0_154.1_13697.t1 | gi|71897031|ref|NP_001025895.1| | protein AATF [Gallus gallus] | 0.0 |
| pfu_aug2.0_154.1_13697.t1 | gi|26346725|dbj|BAC37011.1| | unnamed protein product [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_154.1_13697.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13697.t1 atgctcaatcaaattgaagccacaatcatgaatggcagtgacagacttgtgaacaggagcattgtcctgatggagcaact cacctttaacaacaatgtatattttacagttacaattgcaaagctcactgatagagagaaagatgctggagaagaagtcg gcagtagcaaacttaggagaaagttagctgttctatccacggaggaggaaaagaagtatgctggaaagaagacatctcgg agcaagcttcagcggcagcagttgattaatgatgaagacgacgagtctgtagatgaagatgaagtagctgatttgatgag ttttaagtccaaaatgactaaggcagctcttaatagatcacatgacagcgatgatgatcatgatgaggaggaggaggatg aatttgaagacgacagtgaggaagacgataatgagatacaagaaaatactggagaagacgataatgataactcaagtcat gatgagatggaggaggaggatgatagcgaggaagatgagtcagaagataatgaagatgaattagaagaagatgagggagg gataagcagtttttctaatacagatgtacaaggggaagtgcagaaaggtcaggccgccaaacaacaactagggctgtggg attccctgttggaaggcagaattagatttcagaagacaatcagccttgttaaccagctacctcaacctgatacatggaca gagctggtagaagagggggaacaatcattacaacaacagttaattaatgtgcagtcacagttgaaagacctgctagacaa actactacatgtccagactttgttattactgcagcataacgagaccaaacatatcatcactggtaataaagtgccaatca gctcagctgtcgatgaagatgatgaagaaatcacaagtgaatcggaggatgaagaaaaagagtatgatgttaaaaagcag aaaaaggaagacaaatcaacagacgatgaaaggggaaaaaagaggaagattgctttagaggacatgccaggtttcttagc taaaagacatgcagcattctcagtgtatagaaatgatactatacagaaatggtatgataagacaaagttatccagtggta aagttaagagcaagtcattcgggagttttgaaatgtccactctaaagcagatagagcagctactttaa |
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Protein
| Protein ID | pfu_aug2.0_154.1_13697.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13697.t1 MLNQIEATIMNGSDRLVNRSIVLMEQLTFNNNVYFTVTIAKLTDREKDAGEEVGSSKLRRKLAVLSTEEEKKYAGKKTSR SKLQRQQLINDEDDESVDEDEVADLMSFKSKMTKAALNRSHDSDDDHDEEEEDEFEDDSEEDDNEIQENTGEDDNDNSSH DEMEEEDDSEEDESEDNEDELEEDEGGISSFSNTDVQGEVQKGQAAKQQLGLWDSLLEGRIRFQKTISLVNQLPQPDTWT ELVEEGEQSLQQQLINVQSQLKDLLDKLLHVQTLLLLQHNETKHIITGNKVPISSAVDEDDEEITSESEDEEKEYDVKKQ KKEDKSTDDERGKKRKIALEDMPGFLAKRHAAFSVYRNDTIQKWYDKTKLSSGKVKSKSFGSFEMSTLKQIEQLL |
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