Gene
| Gene Model ID | pfu_aug2.0_154.1_13699 |
|---|---|
| Locus | scaffold154.1 : 355051 ... 364213 : - |
| To GenomeBrowser | scaffold154.1:355051..364213 |
| Genes list of scaffold | scaffold154.1 |
| Synonym | pfu_aug1.0_5050.1_01889 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_154.1_13699.t1 | 1 | 1 | adh_short | 69 | 236 | 7.8e-27 | 94.2 | 5.0e-30 | 1.2e-26 | 93.5 |
| pfu_aug2.0_154.1_13699.t1 | 2 | 1 | KR | 70 | 235 | 2.1e-09 | 37.3 | 1.7e-12 | 4.2e-09 | 36.3 |
| pfu_aug2.0_154.1_13699.t1 | 1 | 1 | adh_short_C2 | 76 | 243 | 4.1e-13 | 49.6 | 2.4e-16 | 5.9e-13 | 49.1 |
| pfu_aug2.0_154.1_13699.t1 | 2 | 2 | KR | 264 | 283 | 2.1e-09 | 37.3 | 2.4 | 6000.0 | -3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_154.1_13699.t1 | gi|676455176|ref|XP_009053920.1| | hypothetical protein LOTGIDRAFT_215059 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_154.1_13699.t1 | gi|291227055|ref|XP_002733500.1| | PREDICTED: inactive hydroxysteroid dehydrogenase-like protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_154.1_13699.t1 | gi|345308346|ref|XP_001509376.2| | PREDICTED: inactive hydroxysteroid dehydrogenase-like protein 1 isoform X2 [Ornithorhynchus anatinus] | 0.0 |
| pfu_aug2.0_154.1_13699.t1 | gi|620948278|ref|XP_007653907.1| | PREDICTED: inactive hydroxysteroid dehydrogenase-like protein 1 isoform X3 [Ornithorhynchus anatinus] | 0.0 |
| pfu_aug2.0_154.1_13699.t1 | gi|291415152|ref|XP_002723818.1| | PREDICTED: inactive hydroxysteroid dehydrogenase-like protein 1 [Oryctolagus cuniculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_154.1_13699.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13699.t1 atggctgctgtggatcgatttgggtttcttttcaaggaaatttcagactatttctccaatataagagatattcttgcttt tataggcgtattgtatgcatcaaagaaaacattacattactcgtacgaagttttaaaagctgtcaatgaccatgtgctaa gcaaactgtcatttataggtgatcttcgacgaagatacggctcatgggcagtgatcacaggtagtagcgaggggataggt aaggcttatgctcgggagctagctaggaggaaagtgaatgttgtacttattagcaggggagaaaacagattgtacaaaac agcaagagaaatagaagaggaatttggagtggagacttgcactgtgccagtagattttaaccttggaccagatgtattta gtacaatatggaatgccatcaaagataaggaaataggtatattagtgaataatgtaggtgtaatgtatgatttccctcag cagtttctggacgtgccgcaagaaagattatggcaactgatcaacgttaatgtagcagcagccaccatgatgacttacat ggtaatgccacagatggttgaaaggagaaaaggggccattgtgatgatgtcatcaggggcctgtactcaaataactccac agatgactatatatgcagccactaagagtttccttgactactttgcacgttcccttcagtatgagtataagaacagtggt gtagtggtacatcgtaccagtggttactggcctcatacaatacagtcatggttttctgagagcataccagagtggctttg gatgtggggagcaaccagactgaacaatgctctgaggcgtcaggcagaggaaagactcagactcaagtctatagctcgcg aactcagtgagcagtcactcgactcggagtcatcctag |
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Protein
| Protein ID | pfu_aug2.0_154.1_13699.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_154.1_13699.t1 MAAVDRFGFLFKEISDYFSNIRDILAFIGVLYASKKTLHYSYEVLKAVNDHVLSKLSFIGDLRRRYGSWAVITGSSEGIG KAYARELARRKVNVVLISRGENRLYKTAREIEEEFGVETCTVPVDFNLGPDVFSTIWNAIKDKEIGILVNNVGVMYDFPQ QFLDVPQERLWQLINVNVAAATMMTYMVMPQMVERRKGAIVMMSSGACTQITPQMTIYAATKSFLDYFARSLQYEYKNSG VVVHRTSGYWPHTIQSWFSESIPEWLWMWGATRLNNALRRQAEERLRLKSIARELSEQSLDSESS |
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