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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1540.1_01693
Locus scaffold1540.1 : 110956 ... 116098 : +
To GenomeBrowser scaffold1540.1:110956..116098
Genes list of scaffold scaffold1540.1
Synonym NA

Manual annotation
Annotation by Blast2GO
Annotation GO
uncharacterized protein loc100371470 GO:0006644 GO:0043227 GO:0044425 GO:0044464 GO:1901564

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1540.1_01693.t1 gi|45478222|gb|AAS66282.1| LRRGT00191 [Rattus norvegicus] 2.0e-08
pfu_aug2.0_1540.1_01693.t1 gi|45478140|gb|AAS66241.1| LRRGT00150 [Rattus norvegicus] 3.0e-08
pfu_aug2.0_1540.1_01693.t1 gi|585678011|ref|XP_006819249.1| PREDICTED: uncharacterized protein LOC100371470 [Saccoglossus kowalevskii] 3.0e-07
pfu_aug2.0_1540.1_01693.t1 gi|723681042|ref|XP_010317841.1| PREDICTED: uncharacterized protein LOC104646245 [Solanum lycopersicum] 6.0e-07
pfu_aug2.0_1540.1_01693.t1 gi|557023387|ref|XP_006011909.1| PREDICTED: uncharacterized protein LOC102366391 [Latimeria chalumnae] 7.0e-07

Transcript
Transcript IDpfu_aug2.0_1540.1_01693.t1
Definition-
>pfu_aug2.0_1540.1_01693.t1
atgctgacagatcaatttgaaatactggatgaaattgagaaatactataataagttgtactcctctagagaccatgaatt
agtagaagtaaatttgaataatttattagataagtttgaaataccaaagttaacatcagaaatggcattagatcctgaag
gcagcatagaatttggggaagcagggaaagctttgaaacacatgcgtaatgataagagcccgggagcagatggttataca
gcagagttctttaagttcttttggaaaatatcggaaaatttctggttaggtcattaa

Protein
Protein IDpfu_aug2.0_1540.1_01693.t1
Definition-
>pfu_aug2.0_1540.1_01693.t1
MLTDQFEILDEIEKYYNKLYSSRDHELVEVNLNNLLDKFEIPKLTSEMALDPEGSIEFGEAGKALKHMRNDKSPGADGYT
AEFFKFFWKISENFWLGH

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