Gene
| Gene Model ID | pfu_aug2.0_15410.1_03206 |
|---|---|
| Locus | scaffold15410.1 : 1 ... 2350 : + |
| To GenomeBrowser | scaffold15410.1:1..2350 |
| Genes list of scaffold | scaffold15410.1 |
| Synonym | pfu_aug1.0_7052.1_60185 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15410.1_03206.t1 | 1 | 1 | COG4 | 6 | 96 | 2.8e-22 | 78.9 | 4.1e-26 | 3.0e-22 | 78.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15410.1_03206.t1 | gi|676494613|ref|XP_009066618.1| | hypothetical protein LOTGIDRAFT_108827, partial [Lottia gigantea] | 2.0e-25 |
| pfu_aug2.0_15410.1_03206.t1 | gi|524910742|ref|XP_005110245.1| | PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Aplysia californica] | 3.0e-25 |
| pfu_aug2.0_15410.1_03206.t1 | gi|291230278|ref|XP_002735095.1| | PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Saccoglossus kowalevskii] | 3.0e-25 |
| pfu_aug2.0_15410.1_03206.t1 | gi|390346680|ref|XP_785373.3| | PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Strongylocentrotus purpuratus] | 9.0e-25 |
| pfu_aug2.0_15410.1_03206.t1 | gi|632975069|ref|XP_007904024.1| | PREDICTED: conserved oligomeric Golgi complex subunit 4, partial [Callorhinchus milii] | 9.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_15410.1_03206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15410.1_03206.t1 ctgtcagaatcctcatataagactttagtattagcagataacatagattataacgacaaacaagccaatgtcatctatgc agaaacttctacacagctgtttgaagccatagccaaggttgtggaaatacggcagccacttgtagaaacatattatggtc atggtagattattcacgttaatgaagatattacaaacagaatgtgatagacaatcaaggaaaatcatagaaaaatttaga cacaaaagggactttgacagagtggtacaacaggtccaacaagattcagtattccacaggccaaatgccacagaaaa |
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Protein
| Protein ID | pfu_aug2.0_15410.1_03206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15410.1_03206.t1 LSESSYKTLVLADNIDYNDKQANVIYAETSTQLFEAIAKVVEIRQPLVETYYGHGRLFTLMKILQTECDRQSRKIIEKFR HKRDFDRVVQQVQQDSVFHRPNATE |
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