Gene
| Gene Model ID | pfu_aug2.0_1545.1_18395 |
|---|---|
| Locus | scaffold1545.1 : 43416 ... 83315 : - |
| To GenomeBrowser | scaffold1545.1:43416..83315 |
| Genes list of scaffold | scaffold1545.1 |
| Synonym | pfu_aug1.0_13726.1_68670 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription factor etv6 isoform x2 | GO:0003700 GO:0005634 GO:0006355 GO:0043565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1545.1_18395.t4 | 1 | 1 | SAM_PNT | 2 | 46 | 4.7e-08 | 32.6 | 1.2e-11 | 9.0e-08 | 31.7 |
| pfu_aug2.0_1545.1_18395.t4 | 1 | 1 | Ets | 219 | 300 | 5.2e-33 | 113.0 | 1.2e-36 | 8.6e-33 | 112.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1545.1_18395.t4 | gi|557299211|ref|XP_006031849.1| | PREDICTED: transcription factor ETV6 isoform X2 [Alligator sinensis] | 4.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_1545.1_18395.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1545.1_18395.t1 atgctgaaggaactcgatatgtctttcttctccattctaacaggtaaagccctgtgtctcctcagaagaagcgacttcat ggaaagagcaccaaagaatggagatattctctacaacgcattacaaaaattagcacaaaaaactaccggttaaggtggtt tgttatgttcccctttgccatccttcccttcaacacttatacctccagtcagtgtcacgtgtggctatcctcaacaaccc cagctcacacaaggtgaaagtccctctcagaatggtcttctactgttagcgccgtcatcctccgccctgaccacgcccat ctgttctaccaagccccgaccatttgtacccatactcccacaacccgtgggactcggaccaaaaacggagggctgtgtct catccataccaggagcgggttctatgaccggaggagtggaggccgacagtgactccgaccctgacgacgcctccgagaca gaaggagtgttgagtcccgcccccagtgcctcggatccggagtccctatctgataacgaagagaacagcagtcaaacgga ccagaaccatggaagtgacatgcgcttgagctatatgggaaatgtaaacggctcggattcaatgtcgtatccacgcatta aacaagactcagattgtcgtctgctgtgggaattcatccaccagttgttacagaatccatgttacaaggactacgtgtgc tgggagaagcaggacgagtatgtcttcaggatcaataatcctatgggattagcccaactctggggacaccagaaaaacag gtccaatatgacgtacgagaaactgtcccgagcactacggtactactacagaatgaatatcatcaagaaagtgtctggca aaagactcacctacaagtttatgcagcctccgtccaacattcagaaaggacaacgtggggcgaaacctcacagtaaatct tgtctttcaacatccatatcaaacttaaaacaggaagtgacagagtcgtctgtagcctcaaatggtgatagacctgtaga gcgtgccatatcatatcctataaacactccatcgattcacagacccttacctttacttccaaccctcgataggagtccga ttaaatcagaagtcccaaatttttgtgatttttcttcaccaaacaacgaagtttttagactatcgccgtctatgagcaaa gagttcccaaaaagtccagcagaagagttagttacatcaccctttccaccaaatttgatcaacgctcatacaaacgcttt atcggttaaacgggaaccaggaatggatgaagcacatgattttacaatgactacattaaaacgaaaagaacgattgagtc aagagtccgaccagggtcatagtacatcgagttctcccgtgcaaaacaacgaatccagattacccttgcttttaaatttc atacaagatagatcgccatcaagctga |
|
| Transcript ID | pfu_aug2.0_1545.1_18395.t2 |
| Definition | - |
>pfu_aug2.0_1545.1_18395.t2 atgctgaaggaactcgatatgtctttcttctccattctaacaggtaaagccctgtgtctcctcagaagaagcgacttcat ggaaagagcaccaaagaatggagatattctctacaacgcattacaaaaattagcacaaaaaactaccggtggtttgttat gttcccctttgccatccttcccttcaacacttatacctccagtcagtgtcacgtgtggctatcctcaacaaccccagctc acacaaggtgaaagtccctctcagaatggtcttctactgttagcgccgtcatcctccgccctgaccacgcccatctgttc taccaagccccgaccatttgtacccatactcccacaacccgtgggactcggaccaaaaacggagggctgtgtctcatcca taccaggagcgggttctatgaccggaggagtggaggccgacagtgactccgaccctgacgacgcctccgagacagaagag aacagcagtcaaacggaccagaaccatggaagtgacatgcgcttgagctatatgggaaatgtaaacggctcggattcaat gtcgtatccacgcattaaacaagactcagattgtcgtctgctgtgggaattcatccaccagttgttacagaatccatgtt acaaggactacgtgtgctgggagaagcaggacgagtatgtcttcaggatcaataatcctatgggattagcccaactctgg ggacaccagaaaaacaggtccaatatgacgtacgagaaactgtcccgagcactacggtactactacagaatgaatatcat caagaaagtgtctggcaaaagactcacctacaagtttatgcagcctccgtccaacattcagaaaggacaacgtggggcga aacctcacagtaaatcttgtctttcaacatccatatcaaacttaaaacaggaagtgacagagtcgtctgtagcctcaaat ggtgatagacctgtagagcgtgccatatcatatcctataaacactccatcgattcacagacccttacctttacttccaac cctcgataggagtccgattaaatcagaagtcccaaatttttgtgatttttcttcaccaaacaacgaagtttttagactat cgccgtctatgagcaaagagttcccaaaaagtccagcagaagagttagttacatcaccctttccaccaaatttgatcaac gctcatacaaacgctttatcggttaaacgggaaccaggaatggatgaagcacatgattttacaatgactacattaaaacg aaaagaacgattgagtcaagagtccgaccagggtcatagtacatcgagttctcccgtgcaaaacaacgaatccagattac ccttgcttttaaatttcatacaagatagatcgccatcaagctga |
|
| Transcript ID | pfu_aug2.0_1545.1_18395.t3 |
| Definition | - |
>pfu_aug2.0_1545.1_18395.t3 atgctgaaggaactcgatatgtctttcttctccattctaacaggtaaagccctgtgtctcctcagaagaagcgacttcat ggaaagagcaccaaagaatggagatattctctacaacgcattacaaaaattagcacaaaaaactaccggtggtttgttat gttcccctttgccatccttcccttcaacacttatacctccagtcagtgtcacgtgtggctatcctcaacaaccccagctc acacaaggtgaaagtccctctcagaatggtcttctactgttagcgccgtcatcctccgccctgaccacgcccatctgttc taccaagccccgaccatttgtacccatactcccacaacccgtgggactcggaccaaaaacggagggctgtgtctcatcca taccaggagtgttgagtcccgcccccagtgcctcggatccggagtccctatctgataacgaagagaacagcagtcaaacg gaccagaaccatggaagtgacatgcgcttgagctatatgggaaatgtaaacggctcggattcaatgtcgtatccacgcat taaacaagactcagattgtcgtctgctgtgggaattcatccaccagttgttacagaatccatgttacaaggactacgtgt gctgggagaagcaggacgagtatgtcttcaggatcaataatcctatgggattagcccaactctggggacaccagaaaaac aggtccaatatgacgtacgagaaactgtcccgagcactacggtactactacagaatgaatatcatcaagaaagtgtctgg caaaagactcacctacaagtttatgcagcctccgtccaacattcagaaaggacaacgtggggcgaaacctcacagtaaat cttgtctttcaacatccatatcaaacttaaaacaggaagtgacagagtcgtctgtagcctcaaatggtgatagacctgta gagcgtgccatatcatatcctataaacactccatcgattcacagacccttacctttacttccaaccctcgataggagtcc gattaaatcagaagtcccaaatttttgtgatttttcttcaccaaacaacgaagtttttagactatcgccgtctatgagca aagagttcccaaaaagtccagcagaagagttagttacatcaccctttccaccaaatttgatcaacgctcatacaaacgct ttatcggttaaacgggaaccaggaatggatgaagcacatgattttacaatgactacattaaaacgaaaagaacgattgag tcaagagtccgaccagggtcatagtacatcgagttctcccgtgcaaaacaacgaatccagattacccttgcttttaaatt tcatacaagatagatcgccatcaagctga |
|
| Transcript ID | pfu_aug2.0_1545.1_18395.t4 |
| Definition | - |
>pfu_aug2.0_1545.1_18395.t4 atgctgaaggaactcgatatgtctttcttctccattctaacaggtaaagccctgtgtctcctcagaagaagcgacttcat ggaaagagcaccaaagaatggagatattctctacaacgcattacaaaaattagcacaaaaaactaccggtggtttgttat gttcccctttgccatccttcccttcaacacttatacctccagtcagtgtcacgtgtggctatcctcaacaaccccagctc acacaaggtgaaagtccctctcagaatggtcttctactgttagcgccgtcatcctccgccctgaccacgcccatctgttc taccaagccccgaccatttgtacccatactcccacaacccgtgggactcggaccaaaaacggagggctgtgtctcatcca taccaggagcgggttctatgaccggaggagtggaggccgacagtgactccgaccctgacgacgcctccgagacagaagga gtgttgagtcccgcccccagtgcctcggatccggagtccctatctgataacgaagagaacagcagtcaaacggaccagaa ccatggaagtgacatgcgcttgagctatatgggaaatgtaaacggctcggattcaatgtcgtatccacgcattaaacaag actcagattgtcgtctgctgtgggaattcatccaccagttgttacagaatccatgttacaaggactacgtgtgctgggag aagcaggacgagtatgtcttcaggatcaataatcctatgggattagcccaactctggggacaccagaaaaacaggtccaa tatgacgtacgagaaactgtcccgagcactacggtactactacagaatgaatatcatcaagaaagtgtctggcaaaagac tcacctacaagtttatgcagcctccgtccaacattcagaaaggacaacgtggggcgaaacctcacagtaaatcttgtctt tcaacatccatatcaaacttaaaacaggaagtgacagagtcgtctgtagcctcaaatggtgatagacctgtagagcgtgc catatcatatcctataaacactccatcgattcacagacccttacctttacttccaaccctcgataggagtccgattaaat cagaagtcccaaatttttgtgatttttcttcaccaaacaacgaagtttttagactatcgccgtctatgagcaaagagttc ccaaaaagtccagcagaagagttagttacatcaccctttccaccaaatttgatcaacgctcatacaaacgctttatcggt taaacgggaaccaggaatggatgaagcacatgattttacaatgactacattaaaacgaaaagaacgattgagtcaagagt ccgaccagggtcatagtacatcgagttctcccgtgcaaaacaacgaatccagattacccttgcttttaaatttcatacaa gatagatcgccatcaagctga |
|
Protein
| Protein ID | pfu_aug2.0_1545.1_18395.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1545.1_18395.t1 MLKELDMSFFSILTGKALCLLRRSDFMERAPKNGDILYNALQKLAQKTTGXGGLLCSPLPSFPSTLIPPVSVTCGYPQQP QLTQGESPSQNGLLLLAPSSSALTTPICSTKPRPFVPILPQPVGLGPKTEGCVSSIPGAGSMTGGVEADSDSDPDDASET EGVLSPAPSASDPESLSDNEENSSQTDQNHGSDMRLSYMGNVNGSDSMSYPRIKQDSDCRLLWEFIHQLLQNPCYKDYVC WEKQDEYVFRINNPMGLAQLWGHQKNRSNMTYEKLSRALRYYYRMNIIKKVSGKRLTYKFMQPPSNIQKGQRGAKPHSKS CLSTSISNLKQEVTESSVASNGDRPVERAISYPINTPSIHRPLPLLPTLDRSPIKSEVPNFCDFSSPNNEVFRLSPSMSK EFPKSPAEELVTSPFPPNLINAHTNALSVKREPGMDEAHDFTMTTLKRKERLSQESDQGHSTSSSPVQNNESRLPLLLNF IQDRSPSS |
|
| Protein ID | pfu_aug2.0_1545.1_18395.t2 |
| Definition | - |
>pfu_aug2.0_1545.1_18395.t2 MLKELDMSFFSILTGKALCLLRRSDFMERAPKNGDILYNALQKLAQKTTGGLLCSPLPSFPSTLIPPVSVTCGYPQQPQL TQGESPSQNGLLLLAPSSSALTTPICSTKPRPFVPILPQPVGLGPKTEGCVSSIPGAGSMTGGVEADSDSDPDDASETEE NSSQTDQNHGSDMRLSYMGNVNGSDSMSYPRIKQDSDCRLLWEFIHQLLQNPCYKDYVCWEKQDEYVFRINNPMGLAQLW GHQKNRSNMTYEKLSRALRYYYRMNIIKKVSGKRLTYKFMQPPSNIQKGQRGAKPHSKSCLSTSISNLKQEVTESSVASN GDRPVERAISYPINTPSIHRPLPLLPTLDRSPIKSEVPNFCDFSSPNNEVFRLSPSMSKEFPKSPAEELVTSPFPPNLIN AHTNALSVKREPGMDEAHDFTMTTLKRKERLSQESDQGHSTSSSPVQNNESRLPLLLNFIQDRSPSS |
|
| Protein ID | pfu_aug2.0_1545.1_18395.t3 |
| Definition | - |
>pfu_aug2.0_1545.1_18395.t3 MLKELDMSFFSILTGKALCLLRRSDFMERAPKNGDILYNALQKLAQKTTGGLLCSPLPSFPSTLIPPVSVTCGYPQQPQL TQGESPSQNGLLLLAPSSSALTTPICSTKPRPFVPILPQPVGLGPKTEGCVSSIPGVLSPAPSASDPESLSDNEENSSQT DQNHGSDMRLSYMGNVNGSDSMSYPRIKQDSDCRLLWEFIHQLLQNPCYKDYVCWEKQDEYVFRINNPMGLAQLWGHQKN RSNMTYEKLSRALRYYYRMNIIKKVSGKRLTYKFMQPPSNIQKGQRGAKPHSKSCLSTSISNLKQEVTESSVASNGDRPV ERAISYPINTPSIHRPLPLLPTLDRSPIKSEVPNFCDFSSPNNEVFRLSPSMSKEFPKSPAEELVTSPFPPNLINAHTNA LSVKREPGMDEAHDFTMTTLKRKERLSQESDQGHSTSSSPVQNNESRLPLLLNFIQDRSPSS |
|
| Protein ID | pfu_aug2.0_1545.1_18395.t4 |
| Definition | - |
>pfu_aug2.0_1545.1_18395.t4 MLKELDMSFFSILTGKALCLLRRSDFMERAPKNGDILYNALQKLAQKTTGGLLCSPLPSFPSTLIPPVSVTCGYPQQPQL TQGESPSQNGLLLLAPSSSALTTPICSTKPRPFVPILPQPVGLGPKTEGCVSSIPGAGSMTGGVEADSDSDPDDASETEG VLSPAPSASDPESLSDNEENSSQTDQNHGSDMRLSYMGNVNGSDSMSYPRIKQDSDCRLLWEFIHQLLQNPCYKDYVCWE KQDEYVFRINNPMGLAQLWGHQKNRSNMTYEKLSRALRYYYRMNIIKKVSGKRLTYKFMQPPSNIQKGQRGAKPHSKSCL STSISNLKQEVTESSVASNGDRPVERAISYPINTPSIHRPLPLLPTLDRSPIKSEVPNFCDFSSPNNEVFRLSPSMSKEF PKSPAEELVTSPFPPNLINAHTNALSVKREPGMDEAHDFTMTTLKRKERLSQESDQGHSTSSSPVQNNESRLPLLLNFIQ DRSPSS |
|