Gene
| Gene Model ID | pfu_aug2.0_1545.1_18396 |
|---|---|
| Locus | scaffold1545.1 : 110087 ... 139815 : - |
| To GenomeBrowser | scaffold1545.1:110087..139815 |
| Genes list of scaffold | scaffold1545.1 |
| Synonym | pfu_aug1.0_151975.1_42790 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1545.1_18396.t1 | 1 | 1 | VWA | 292 | 380 | 1.1e-12 | 48.0 | 3.2e-16 | 2.3e-12 | 46.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1545.1_18396.t1 | gi|524909222|ref|XP_005109660.1| | PREDICTED: collagen alpha-6(VI) chain-like [Aplysia californica] | 6.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_1545.1_18396.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1545.1_18396.t1 atggacaggattttatcagtgttacctgttggtagtataagtatagaatatcctggtcttgttgacaatctcaacagcag tcagttagtgagtatatttaatgatctaaagagcacatcgcatgagaacgacaaggtttatcatgcgttcttgggttata aatggaacggaggaaacattgttgattccaacaacataacagtggacgaggacagatacgaagatctcgtctacgaacag ttcaaaagaactcaatgttcttatgtcagcccaacggccgaaataaactggataggatgttcaatggagtcggcaactct gtgtacatgtgacgtcactcatacaactctaacagaaaatataacagatgttggatactttgtcgacaaactctatggca attcttacatcatgacagagaagattagaacgcagaataaaggctacaaggtttgccaggacttcaactgtacaatactg acactgaaatcaataacagacctttcgatcatttcgagagtttttgccgaagcccctcctggatcgtccgacttcgacaa ggcattcattggatactcgggtaacaaagaacacatcatttctacagacggaagcttaatagatgatgacgtcatgactt acttgaatgacagcattggacattgttttaaggtgcaatcacgtttcgttaccacgacatcctgtaattctgataaatat ggactttgtgtggtagataatataatcctgcctgatgaggagcacagcaccactgtacccacgtcgtccaatgaaataaa tagttcctcaactacagttgatgataataactcacaaataagcacaggttgcaatacttacctgaaaccacttgatatag tttacatgttggataaatcaggtagtataggcgtaaacaactggcaaaaacagattgagttcctgaagaacctgacagag catctagacgtttcagttaaccgtacccgggtcgctgcactgcagcatgccacaaaagcagatgttatgtttggattcga cgataaaacatccaggaaagaagtcattgacgctttagaccttaacatacatcagcaaacaagtggaaattcaaaatacc atagagctttaacagcggtaaacacatctacctgtgaatgtacaacaaactgcgtccagtcaaatgatacaaagtatagg acaaaggcgaaaattgaagagttgaaacaagcacttaaacttgataaagagtcattgtcgaagactaagcgcgggaaaac tagtgctgaggacaaacgtttctcctctgctatgattggttattgctctgttagtatgctagctatagtgggatcttgga tcgtgataccagatgtttggactttgatcaactggaccttgaataaaatcaggatagaaaaggaaggctactag |
|
Protein
| Protein ID | pfu_aug2.0_1545.1_18396.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1545.1_18396.t1 MDRILSVLPVGSISIEYPGLVDNLNSSQLVSIFNDLKSTSHENDKVYHAFLGYKWNGGNIVDSNNITVDEDRYEDLVYEQ FKRTQCSYVSPTAEINWIGCSMESATLCTCDVTHTTLTENITDVGYFVDKLYGNSYIMTEKIRTQNKGYKVCQDFNCTIL TLKSITDLSIISRVFAEAPPGSSDFDKAFIGYSGNKEHIISTDGSLIDDDVMTYLNDSIGHCFKVQSRFVTTTSCNSDKY GLCVVDNIILPDEEHSTTVPTSSNEINSSSTTVDDNNSQISTGCNTYLKPLDIVYMLDKSGSIGVNNWQKQIEFLKNLTE HLDVSVNRTRVAALQHATKADVMFGFDDKTSRKEVIDALDLNIHQQTSGNSKYHRALTAVNTSTCECTTNCVQSNDTKYR TKAKIEELKQALKLDKESLSKTKRGKTSAEDKRFSSAMIGYCSVSMLAIVGSWIVIPDVWTLINWTLNKIRIEKEGY |
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