Gene
| Gene Model ID | pfu_aug2.0_1553.1_11723 |
|---|---|
| Locus | scaffold1553.1 : 992 ... 24715 : - |
| To GenomeBrowser | scaffold1553.1:992..24715 |
| Genes list of scaffold | scaffold1553.1 |
| Synonym | pfu_aug1.0_2807.1_23085 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sedoheptulokinase | GO:0009987 GO:0050896 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1553.1_11723.t1 | 1 | 1 | FGGY_N | 5 | 258 | 8.3e-27 | 94.0 | 1.5e-28 | 1.1e-24 | 87.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1553.1_11723.t1 | gi|700420976|ref|XP_009948714.1| | PREDICTED: sedoheptulokinase [Leptosomus discolor] | 0.0 |
| pfu_aug2.0_1553.1_11723.t1 | gi|530616988|ref|XP_005298233.1| | PREDICTED: sedoheptulokinase isoform X1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_1553.1_11723.t1 | gi|675429496|ref|XP_008928722.1| | PREDICTED: sedoheptulokinase [Manacus vitellinus] | 0.0 |
| pfu_aug2.0_1553.1_11723.t1 | gi|697477525|ref|XP_009671313.1| | PREDICTED: sedoheptulokinase [Struthio camelus australis] | 0.0 |
| pfu_aug2.0_1553.1_11723.t1 | gi|291232091|ref|XP_002735979.1| | PREDICTED: sedoheptulokinase-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1553.1_11723.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1553.1_11723.t1 atggatcccacattccttggcatagaccttggtactacatcagtgaaggtagttctcatctcggcagagggaattttgct gaagtccgtctcccaccccacgtccgctgatgttcaaagcagtataggctgcaaaggatgcgagcaaaatgtcgttgaaa taattaaagcgctccaaaagtgcatggcagaaatcattgatgacggtaaactgtgcgtgtcaaaggtcggcatctccgga cagatgcatggagtaatgatgtggaaaagtagtcatatgaagaaatacagggaaggattgtctatagaggctggaggaga tacaactgcatctttctttgaatctaccagtaatttgattacgtggcaggaccagagatgtgacccagatttcctccaat cgctgccgagcccagactctcaccttaccctcgctacaggtcagggctgtcccacactgatttggctgaagaagaatcaa cctgacttgctacaagaatatgactgtgctggtacggtaatggatttcctggtagcaatcctatgtcagaggtcacgacc cctaatgacctttcagatagccgctagttggggatactttaattgtcagaaaggacagtggaatcaaagacttgaggtag ctgactttccaatggctctactccctgaggtagtgagctctggtgagcctgcaggatccctgcaatctgattggttagga gtatcagatggtacaatcttattggctgccttaggagatatgcagtgtgctgtgtgctcatcactcaaacaatcaaatca tgcagttttcaatatgagtacttcctgtcagctgtcatttcccatgatgcaccctgatttcaaacttcctgttacacctg acccagaatcctctgtacagtattttccgtattttgacggtatttatatcgctgtagctgccagccttaactgtggtaat gtcctcgctggttatgtatctatgatacagaaatggatggctaaccttggggtcaatattgatgaaattaaaatttggca gaacttcctaacacagtcagctgatatcaggggggaggtggacctacctgtgatccaccccacactctatggagaaagac actgccccagtcagagaggctatatggaaaacataaccacagacaaccttgaacttggtgctatttttagagcattatgc acaggaatagtgagaaacattcatgaaatgatgagctctagttttcttaaagaaaatggcgtcagtacattagcttgcac tggaactgtgatcgctagaaatgagtgggtaaaacaggagatagacttattatatgggggtatagagagggagtatgggc atagctgtgattctgcatatgggtctgctctcgttgccgccaagggaattcctaaactccgtacggtatga |
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Protein
| Protein ID | pfu_aug2.0_1553.1_11723.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1553.1_11723.t1 MDPTFLGIDLGTTSVKVVLISAEGILLKSVSHPTSADVQSSIGCKGCEQNVVEIIKALQKCMAEIIDDGKLCVSKVGISG QMHGVMMWKSSHMKKYREGLSIEAGGDTTASFFESTSNLITWQDQRCDPDFLQSLPSPDSHLTLATGQGCPTLIWLKKNQ PDLLQEYDCAGTVMDFLVAILCQRSRPLMTFQIAASWGYFNCQKGQWNQRLEVADFPMALLPEVVSSGEPAGSLQSDWLG VSDGTILLAALGDMQCAVCSSLKQSNHAVFNMSTSCQLSFPMMHPDFKLPVTPDPESSVQYFPYFDGIYIAVAASLNCGN VLAGYVSMIQKWMANLGVNIDEIKIWQNFLTQSADIRGEVDLPVIHPTLYGERHCPSQRGYMENITTDNLELGAIFRALC TGIVRNIHEMMSSSFLKENGVSTLACTGTVIARNEWVKQEIDLLYGGIEREYGHSCDSAYGSALVAAKGIPKLRTV |
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