Gene
| Gene Model ID | pfu_aug2.0_1555.1_18401 |
|---|---|
| Locus | scaffold1555.1 : 73515 ... 94945 : - |
| To GenomeBrowser | scaffold1555.1:73515..94945 |
| Genes list of scaffold | scaffold1555.1 |
| Synonym | pfu_aug1.0_2191.1_44267 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1555.1_18401.t2 | 1 | 1 | SH2 | 13 | 53 | 9.2e-11 | 41.4 | 4.6e-14 | 1.7e-10 | 40.5 |
| pfu_aug2.0_1555.1_18401.t2 | 2 | 1 | SH3_2 | 63 | 113 | 2.1e-22 | 78.3 | 1.4e-13 | 5.1e-10 | 38.6 |
| pfu_aug2.0_1555.1_18401.t2 | 2 | 1 | SH3_1 | 64 | 110 | 2.6e-22 | 77.9 | 1.1e-19 | 4.2e-16 | 58.0 |
| pfu_aug2.0_1555.1_18401.t2 | 2 | 1 | SH3_9 | 65 | 113 | 1.1e-18 | 66.5 | 9.2e-14 | 3.4e-10 | 39.3 |
| pfu_aug2.0_1555.1_18401.t2 | 2 | 2 | SH3_2 | 204 | 245 | 2.1e-22 | 78.3 | 3.1e-13 | 1.2e-09 | 37.5 |
| pfu_aug2.0_1555.1_18401.t2 | 2 | 2 | SH3_9 | 205 | 240 | 1.1e-18 | 66.5 | 3.1e-09 | 1.2e-05 | 24.8 |
| pfu_aug2.0_1555.1_18401.t2 | 2 | 2 | SH3_1 | 207 | 240 | 2.6e-22 | 77.9 | 4.7e-07 | 0.0018 | 17.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1555.1_18401.t2 | gi|571570081|ref|XP_006560280.1| | PREDICTED: adapter molecule Crk-like isoform X2 [Apis mellifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1555.1_18401.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1555.1_18401.t1 atggcagctgagtttgatccagatgataagtacagttggtactttggtccattgagtcgagatgaaagtaacgacatact tatgccagagagggagagtggcgtttttctagtcagggagagcaagtctattcccggagattacgtgctgtgtgtcaata tgttcacattggcaccaagagaaaaagttgtcgctaaatttgatttcccaggcagggatccagaagatctaccatttcaa aaaggtgatgttctagaagtgatatccaaagacgagaaagactggtggacgtgtcgtaacaatcgatgtcaagttggtca gatacctgtaccgtacatttctaaggatgctataccagaaatggagcctgcgtcccaactgaggcgggaatcttttcaga aagagattcccgagtttaaagagtttgatccctcggctcagaataaatctgacatacaaagtcataatgaaggccccggt tatagggccccagaacccattagagagattcagctaccagcaagagcagtagttacagtgaacaggatacctaatgcata tgataaaacacagttaaggttagagaaaggtgaaatattgttagtgactgccatgaactcaaacggtcagtgggaaggtg aagtgaatggcaggaaaggattttttccattcactcatgtgaaactgttagaacgaaatgatcaagaagatggaacttag |
|
| Transcript ID | pfu_aug2.0_1555.1_18401.t2 |
| Definition | - |
>pfu_aug2.0_1555.1_18401.t2 atggcagctgagtttgatccagatgataagtacagttggtactttggtccattgagtcgagatgaaagtaacgacatact tatgccagagagggagagtggcgtttttctagtcagggagagcaagtctattcccggagattacgtgctgtgtgtcaata tgttcacattggcaccaagagaaaaagttgtcgctaaatttgatttcccaggcagggatccagaagatctaccatttcaa aaaggtgatgttctagaagtgatatccaaagacgagaaagactggtggacgtgtcgtaacaatcgatgtcaagttggtca gatacctgtaccgtacatttctaaggatgctataccagaaatggagcctgcgtcccaactgaggcgggaatcttttcaga aagagattcccgagtttaaagagtttgatccctcggctcagaataaatctgacatacaaagtcataatgaaggccccggt tatagggccccagaacccattagagagattcagctaccagcaagagcagtagttacagtgaacaggatacctaatgcata tgataaaacacagttaaggttagagttaaggttagaggtgagtaatgtatatgataaaacacagttaaggttagagaaag gtgaaatattgttagtgactgccatgaactcaaacggtcagtgggaaggtgaagtgaatggcaggaaaggattttttcca ttcactcatgtgaaactgttagaacgaaatgatcaagaagatggaacttag |
|
Protein
| Protein ID | pfu_aug2.0_1555.1_18401.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1555.1_18401.t1 MAAEFDPDDKYSWYFGPLSRDESNDILMPERESGVFLVRESKSIPGDYVLCVNMFTLAPREKVVAKFDFPGRDPEDLPFQ KGDVLEVISKDEKDWWTCRNNRCQVGQIPVPYISKDAIPEMEPASQLRRESFQKEIPEFKEFDPSAQNKSDIQSHNEGPG YRAPEPIREIQLPARAVVTVNRIPNAYDKTQLRLEKGEILLVTAMNSNGQWEGEVNGRKGFFPFTHVKLLERNDQEDGT |
|
| Protein ID | pfu_aug2.0_1555.1_18401.t2 |
| Definition | - |
>pfu_aug2.0_1555.1_18401.t2 MAAEFDPDDKYSWYFGPLSRDESNDILMPERESGVFLVRESKSIPGDYVLCVNMFTLAPREKVVAKFDFPGRDPEDLPFQ KGDVLEVISKDEKDWWTCRNNRCQVGQIPVPYISKDAIPEMEPASQLRRESFQKEIPEFKEFDPSAQNKSDIQSHNEGPG YRAPEPIREIQLPARAVVTVNRIPNAYDKTQLRLELRLEVSNVYDKTQLRLEKGEILLVTAMNSNGQWEGEVNGRKGFFP FTHVKLLERNDQEDGT |
|