Gene
| Gene Model ID | pfu_aug2.0_1557.1_24997 |
|---|---|
| Locus | scaffold1557.1 : 1 ... 6455 : - |
| To GenomeBrowser | scaffold1557.1:1..6455 |
| Genes list of scaffold | scaffold1557.1 |
| Synonym | pfu_aug1.0_396.1_65384 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| adp-ribosylation factor-like protein 2 | GO:0005525 GO:0005758 GO:0005813 GO:0019003 GO:0031116 GO:0034260 GO:0051297 GO:0051457 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1557.1_24997.t1 | 1 | 1 | Arf | 4 | 176 | 0.0 | 245.9 | 0.0 | 0.0 | 245.8 |
| pfu_aug2.0_1557.1_24997.t1 | 2 | 1 | G-alpha | 10 | 37 | 9.1e-12 | 44.3 | 3.5e-07 | 0.00058 | 18.6 |
| pfu_aug2.0_1557.1_24997.t1 | 1 | 1 | SRPRB | 16 | 143 | 1.5e-12 | 47.0 | 1.3e-15 | 2.1e-12 | 46.6 |
| pfu_aug2.0_1557.1_24997.t1 | 1 | 1 | Gtr1_RagA | 18 | 129 | 2.2e-09 | 36.8 | 1.6e-12 | 2.7e-09 | 36.5 |
| pfu_aug2.0_1557.1_24997.t1 | 1 | 1 | Miro | 18 | 128 | 8.1e-08 | 32.7 | 6.9e-11 | 1.1e-07 | 32.3 |
| pfu_aug2.0_1557.1_24997.t1 | 1 | 1 | Ras | 19 | 176 | 1.0e-10 | 41.2 | 7.4e-14 | 1.2e-10 | 40.9 |
| pfu_aug2.0_1557.1_24997.t1 | 2 | 1 | MMR_HSR1 | 19 | 109 | 8.9e-07 | 28.8 | 1.3e-09 | 2.1e-06 | 27.6 |
| pfu_aug2.0_1557.1_24997.t1 | 2 | 2 | G-alpha | 47 | 93 | 9.1e-12 | 44.3 | 2.0e-09 | 3.3e-06 | 26.0 |
| pfu_aug2.0_1557.1_24997.t1 | 2 | 2 | MMR_HSR1 | 128 | 137 | 8.9e-07 | 28.8 | 1.5 | 2500.0 | -1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1557.1_24997.t1 | gi|524901237|ref|XP_005107029.1| | PREDICTED: ADP-ribosylation factor-like protein 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1557.1_24997.t1 | gi|291237670|ref|XP_002738749.1| | PREDICTED: ADP-ribosylation factor-like protein 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1557.1_24997.t1 | gi|260804599|ref|XP_002597175.1| | hypothetical protein BRAFLDRAFT_276203 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1557.1_24997.t1 | gi|45361023|ref|NP_989148.1| | ADP-ribosylation factor-like protein 2 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_1557.1_24997.t1 | gi|558195991|ref|XP_006104395.1| | PREDICTED: ADP-ribosylation factor-like protein 2 isoform X2 [Myotis lucifugus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1557.1_24997.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1557.1_24997.t1 atgggtttactaacgattttgaagaaaatgaagcaaaaggaaaaagaagttagaattttaatgctaggactggacaatgc gggaaaaacaacaattttgaagaagttcaacggagaagatatcaacacaatatcacctacactgggcttcaatatcaaaa cattagaacacagaggcttcaaattaaatgtatgggatgttggaggtcaaaggtcattgcgttcgtattggaggaattat tttgagagtacagatggtttgatatgggttgtagacagcgcagacagaatgagattacaagattgtaaagaggaacttca aaacctacttgtagaggagaggctagctggagctacattactagttttctcaaataaacaagatttacctggggccctga agcctgaagaaataaaaaatgctttagatctggacagtattaaaacacatcattggttaatacaagggtgcagtgctgta acgggtgataatttactaaaaggcatagactggatcgtcgacgatatatcatcaaggatatttactatggactag |
|
Protein
| Protein ID | pfu_aug2.0_1557.1_24997.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1557.1_24997.t1 MGLLTILKKMKQKEKEVRILMLGLDNAGKTTILKKFNGEDINTISPTLGFNIKTLEHRGFKLNVWDVGGQRSLRSYWRNY FESTDGLIWVVDSADRMRLQDCKEELQNLLVEERLAGATLLVFSNKQDLPGALKPEEIKNALDLDSIKTHHWLIQGCSAV TGDNLLKGIDWIVDDISSRIFTMD |
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