Gene
| Gene Model ID | pfu_aug2.0_1557.1_24998 |
|---|---|
| Locus | scaffold1557.1 : 9046 ... 23699 : + |
| To GenomeBrowser | scaffold1557.1:9046..23699 |
| Genes list of scaffold | scaffold1557.1 |
| Synonym | pfu_aug1.0_7332.1_24198 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribosomal protein s6 kinase delta-1-like | GO:0004674 GO:0005515 GO:0005524 GO:0005769 GO:0006468 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1557.1_24998.t1 | 2 | 1 | PX | 11 | 91 | 1.2e-08 | 34.7 | 9.7e-12 | 2.9e-08 | 33.5 |
| pfu_aug2.0_1557.1_24998.t1 | 1 | 1 | MIT | 382 | 447 | 9.7e-13 | 47.8 | 7.4e-16 | 2.2e-12 | 46.6 |
| pfu_aug2.0_1557.1_24998.t1 | 2 | 1 | Pkinase | 493 | 567 | 3.2e-27 | 95.3 | 2.1e-06 | 0.0064 | 15.6 |
| pfu_aug2.0_1557.1_24998.t1 | 2 | 2 | PX | 505 | 530 | 1.2e-08 | 34.7 | 1.9 | 5600.0 | -2.9 |
| pfu_aug2.0_1557.1_24998.t1 | 3 | 1 | Pkinase_Tyr | 527 | 567 | 8.6e-09 | 34.8 | 1.2 | 3500.0 | -3.2 |
| pfu_aug2.0_1557.1_24998.t1 | 3 | 2 | Pkinase_Tyr | 583 | 602 | 8.6e-09 | 34.8 | 1.5 | 4400.0 | -3.6 |
| pfu_aug2.0_1557.1_24998.t1 | 2 | 2 | Pkinase | 990 | 1155 | 3.2e-27 | 95.3 | 4.5e-25 | 1.3e-21 | 76.9 |
| pfu_aug2.0_1557.1_24998.t1 | 3 | 3 | Pkinase_Tyr | 997 | 1095 | 8.6e-09 | 34.8 | 7.4e-12 | 2.2e-08 | 33.4 |
| pfu_aug2.0_1557.1_24998.t1 | 1 | 1 | Kinase-like | 1010 | 1093 | 4.0e-06 | 26.0 | 2.3e-09 | 6.8e-06 | 25.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1557.1_24998.t1 | gi|678006142|ref|XP_009079353.1| | PREDICTED: ribosomal protein S6 kinase delta-1 [Acanthisitta chloris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1557.1_24998.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1557.1_24998.t1 atggttttccctctccgttctcaagaaagtctgacagaggttgttgtctggaagagatacaatgacttcaaaagactgta caagagtttatttggccttcacaaggcacttcatagaagagagcagttcccaacatttgccaagccaaaattatttggcc gctttgatgagtcagtgatagaagaaaggagacaaagtgcactgaccttacttgaatttattggattacattcctactta tacaagtccaaagaatttgttgcttttatcaaagatggtaaggtaaggcgtgaattgtcgggtgatatactcaaaccttc agctcttgctatcattccccaagttgagggtaagccgactgatgtacataaagacgatggggtattacagccgactaaac atccacctgacgaggggactgatactggtattgattcagttagagaagtgcaagaaaacagtgatatcagagagtctcaa gaagattccttggatggagtatggaactatccacaggttcctgacaacatcagcctcaactcctatgacgacacggacac ttccgaggtagactcggctctcgggactcctctgcctgtctcggaaatatccttctttgaccccctgacctctgacgact caccacatttggacctaccgaaggaatcaaatctacgtactagtagtagctggctttttgatgctatgaatacatgtgca gagctggaacaagaatcagaattagaagctagatcagattttaaagagtcagaaaatggaatacagatttctgttgaaga aagtcaggaactagagtctggcatggaatctatatctgatcctacactcgctgaagataatgatgaaaacaacagcaggg catcctcaactatcgacctgagtgactttgatcctttaaggtcaaggtcagggtcaaaggttgaaatcggtaaaggtgat attgacctttcaggaagtttcaaggctactgacctaaacaatcataatttttctccaaagagagttgtgacttcttctcc ggcaaaaacaaaatctgcaagtcctttcaaaatgaagaggaaatcaaggagtgataccaaagaaagtgtttccacgatgg atttgggtggaaaggaagattatatttacttggctgccaatcagatttgcttggcacaagattgtgaggctagtgctaag tttgaactggcattttcacactacaaagctggggtcggcattttgctacagggtgtacagagtgacaagaataaatcacg tagggatgctgtacgtagaaagacagcacagtacctgctgaaggctgaagacctgtacaacagacacctctctaaagacg tactggatgaaaaacgatgggctgatgacagcaagctatccccgacttatgagttggatccctcaattagtatgttgaaa ggttcctctgttgatctgaaactgtacaaggtactgggtactatagataaagtactgctagtgatggacaaaaacactga tgaaacatacgtgatgaagaccattcacaagtccgtagatatcaacagcaaaaggatcaggacatttttcccagcccatt gtccgtacatggtcagtctgtataaattctttgagacagattgtgccatacacctgttacttcagcatgctaccggcgga aaactatggaactacataggtgcttatattcaaggccgtaaagatccagttgataatgacgcaaatcagttcggaaatgt ttatgctggtacgaaactccacgagcacgataattctagtcaagattttaatttagagaaaaaaatgaatggggatattg aacctaaatccaaattaatggattcgaatgatgtgcttgtgaaatactcagcttcatcaggtgatggagaaagcaagatt tctattggtcgaaatattgaggaagattcaaccaatgaaaacacaggatatagaaaagaggaggagcaaaaacaggagca ggaaaagggatctatgaagataccagttgataggctagaaagtttctcttctgcagaggatggctttgagggtcaagaag ttaggcctgcttcattggagcaaaaggattttgtctttcaagaactgctacaggatagcaagtctaatttagaacagttt agtatcattagttcagatagcacgagtagtgattgtagagctagagttgatagttttgtctttgacaggagtgatatcat tcaggaagagaatgaagtgcatggtgagtgtgtaggttttgttgatcaagacaatgtattcggtggtgaaaaaaaatcgg atacgccggatcaggatgattcagagattattgtaaaaagtgctagagagttactcaagtctgtggagaggacgttatcc cagactgatgccgaggttaacaaaatgttgaattcgaaagacaatacaggaaatgtgcatcgtgatacattagatgttca aagaacaaaaaatgtgacagaggtagtgacttcaggtcatagcagtgcaactgtgatagatgatagtgactcaaacgagg ccagtatatatgatgtacatcattctagcagctccacagattctgattctatagacaagtgccataaatctgaaaataaa aatagtgctgaagtttactcggctttgaactgtgatacaaatacgagtgaattttacgcaagtaggagtgaaagaactag tacattaaaagcgaccaatcaagatggagattctggctcggaatcttcagaatcaccttcaagaagtaaaacgtctcgat catcaactctagtcaataattctcccgtcaaaaatgtttcggttggaaaattaagcttaacgagaatgaactctaaagaa ttaagtaggtcagcgtccatggaacacgaattgacttcacctccaaggtcgcgacagagaactgtgtcggatgtcttcaa agataccaatatggttgggagtctggagaacgtaagattaccagagtcttgtatcaggcaatggattgcagaaatagtgg tggccttgggaaaactgcatgaggagggcatagtttgtagagatctcagacctgacaacatactattgggtgacagaggt catgtgctactgacctacttttgtcagcttaatcaggtggatcaggaagtggactttacggcagtagatgagctttacgt tgccccggaagtgaagaatgtcaaggggtacacagagagctgtgattggtggagtctgggtgctctaatgtatgaactca tctttggaaggagcctttcaagctgtcatccagggggaataaatctccacacacagttatatttccctgatcatgcgtct gaagaggctaatggcttgttaagacagcttctgtgttacagtgccagagaacgactgggctcaggaatgaatggggcaga ggaaattaaagctcatcctttcttcagtggcattgactggaaccaattagagcaataa |
|
Protein
| Protein ID | pfu_aug2.0_1557.1_24998.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1557.1_24998.t1 MVFPLRSQESLTEVVVWKRYNDFKRLYKSLFGLHKALHRREQFPTFAKPKLFGRFDESVIEERRQSALTLLEFIGLHSYL YKSKEFVAFIKDGKVRRELSGDILKPSALAIIPQVEGKPTDVHKDDGVLQPTKHPPDEGTDTGIDSVREVQENSDIRESQ EDSLDGVWNYPQVPDNISLNSYDDTDTSEVDSALGTPLPVSEISFFDPLTSDDSPHLDLPKESNLRTSSSWLFDAMNTCA ELEQESELEARSDFKESENGIQISVEESQELESGMESISDPTLAEDNDENNSRASSTIDLSDFDPLRSRSGSKVEIGKGD IDLSGSFKATDLNNHNFSPKRVVTSSPAKTKSASPFKMKRKSRSDTKESVSTMDLGGKEDYIYLAANQICLAQDCEASAK FELAFSHYKAGVGILLQGVQSDKNKSRRDAVRRKTAQYLLKAEDLYNRHLSKDVLDEKRWADDSKLSPTYELDPSISMLK GSSVDLKLYKVLGTIDKVLLVMDKNTDETYVMKTIHKSVDINSKRIRTFFPAHCPYMVSLYKFFETDCAIHLLLQHATGG KLWNYIGAYIQGRKDPVDNDANQFGNVYAGTKLHEHDNSSQDFNLEKKMNGDIEPKSKLMDSNDVLVKYSASSGDGESKI SIGRNIEEDSTNENTGYRKEEEQKQEQEKGSMKIPVDRLESFSSAEDGFEGQEVRPASLEQKDFVFQELLQDSKSNLEQF SIISSDSTSSDCRARVDSFVFDRSDIIQEENEVHGECVGFVDQDNVFGGEKKSDTPDQDDSEIIVKSARELLKSVERTLS QTDAEVNKMLNSKDNTGNVHRDTLDVQRTKNVTEVVTSGHSSATVIDDSDSNEASIYDVHHSSSSTDSDSIDKCHKSENK NSAEVYSALNCDTNTSEFYASRSERTSTLKATNQDGDSGSESSESPSRSKTSRSSTLVNNSPVKNVSVGKLSLTRMNSKE LSRSASMEHELTSPPRSRQRTVSDVFKDTNMVGSLENVRLPESCIRQWIAEIVVALGKLHEEGIVCRDLRPDNILLGDRG HVLLTYFCQLNQVDQEVDFTAVDELYVAPEVKNVKGYTESCDWWSLGALMYELIFGRSLSSCHPGGINLHTQLYFPDHAS EEANGLLRQLLCYSARERLGSGMNGAEEIKAHPFFSGIDWNQLEQ |
|