Gene
| Gene Model ID | pfu_aug2.0_1557.1_24999 |
|---|---|
| Locus | scaffold1557.1 : 32315 ... 54735 : - |
| To GenomeBrowser | scaffold1557.1:32315..54735 |
| Genes list of scaffold | scaffold1557.1 |
| Synonym | pfu_aug1.0_10603.1_24769 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuroglobin-like isoform x1 | GO:0006810 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1557.1_24999.t1 | 1 | 1 | Globin | 39 | 145 | 4.5e-20 | 72.0 | 7.6e-24 | 5.6e-20 | 71.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1557.1_24999.t1 | gi|432937242|ref|XP_004082406.1| | PREDICTED: neuroglobin-like [Oryzias latipes] | 3.00018e-42 |
Transcript
| Transcript ID | pfu_aug2.0_1557.1_24999.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1557.1_24999.t1 atgggatgtcaaattacttgtggcaaaaagcaggaaccaccggctttggacaaggaggtccagttatcagaagtacctac tatgaatattgcacgtgaaaaattcacagatgaacagaaagagattgttcgagaaacatggaatatagtcagggaggaca tagctaaaataggtgttgttacatttttaagactattcgagaaaaatcccgatttaaaagacttatttgtgccttttcgt ggaatggacatgaatcaattacgtcagcatgagggtctgagagagcatggtctccgtgttatgggatccatagaaaaatg tgtcgccaggattgacagtcctcggcgatttgacgccatgcttacggaacttggacacaaacacgtcgttttcaatatca aacccgattattttgagcttcttggtcctcagcttatcaccgcaataaaacctgcgatcggggagaaatggacaccggaa gttgaggaagcatggatgaacttttatcacctaattatatataccatgagagtcgctatggtttcatga |
|
Protein
| Protein ID | pfu_aug2.0_1557.1_24999.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1557.1_24999.t1 MGCQITCGKKQEPPALDKEVQLSEVPTMNIAREKFTDEQKEIVRETWNIVREDIAKIGVVTFLRLFEKNPDLKDLFVPFR GMDMNQLRQHEGLREHGLRVMGSIEKCVARIDSPRRFDAMLTELGHKHVVFNIKPDYFELLGPQLITAIKPAIGEKWTPE VEEAWMNFYHLIIYTMRVAMVS |
|