Gene
| Gene Model ID | pfu_aug2.0_1557.1_25001 |
|---|---|
| Locus | scaffold1557.1 : 81377 ... 83965 : - |
| To GenomeBrowser | scaffold1557.1:81377..83965 |
| Genes list of scaffold | scaffold1557.1 |
| Synonym | pfu_aug1.0_17758.1_25652 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin-like protein 5 | GO:0005622 GO:0043226 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1557.1_25001.t1 | 4 | 1 | EF-hand_1 | 14 | 41 | 8.7e-13 | 46.5 | 3.4e-07 | 0.0005 | 19.1 |
| pfu_aug2.0_1557.1_25001.t1 | 4 | 1 | EF-hand_8 | 14 | 40 | 2.8e-08 | 33.2 | 0.00016 | 0.24 | 11.0 |
| pfu_aug2.0_1557.1_25001.t1 | 2 | 1 | EF-hand_7 | 15 | 73 | 2.8e-14 | 52.9 | 2.3e-09 | 3.4e-06 | 27.0 |
| pfu_aug2.0_1557.1_25001.t1 | 5 | 1 | EF-hand_6 | 15 | 41 | 1.8e-11 | 42.8 | 1.6e-07 | 0.00024 | 20.7 |
| pfu_aug2.0_1557.1_25001.t1 | 3 | 1 | EF-hand_5 | 16 | 37 | 9.2e-09 | 34.2 | 2.9e-05 | 0.043 | 13.1 |
| pfu_aug2.0_1557.1_25001.t1 | 2 | 1 | EF-hand_9 | 17 | 59 | 2.4e-06 | 27.3 | 0.024 | 36.0 | 4.3 |
| pfu_aug2.0_1557.1_25001.t1 | 4 | 2 | EF-hand_8 | 26 | 73 | 2.8e-08 | 33.2 | 0.00019 | 0.28 | 10.8 |
| pfu_aug2.0_1557.1_25001.t1 | 5 | 2 | EF-hand_6 | 55 | 74 | 1.8e-11 | 42.8 | 0.69 | 1000.0 | 0.0 |
| pfu_aug2.0_1557.1_25001.t1 | 4 | 2 | EF-hand_1 | 63 | 74 | 8.7e-13 | 46.5 | 0.77 | 1100.0 | -0.7 |
| pfu_aug2.0_1557.1_25001.t1 | 5 | 3 | EF-hand_6 | 92 | 99 | 1.8e-11 | 42.8 | 4.9 | 7300.0 | -2.6 |
| pfu_aug2.0_1557.1_25001.t1 | 4 | 3 | EF-hand_8 | 112 | 138 | 2.8e-08 | 33.2 | 9.7e-06 | 0.014 | 14.9 |
| pfu_aug2.0_1557.1_25001.t1 | 2 | 2 | EF-hand_7 | 114 | 172 | 2.8e-14 | 52.9 | 9.7e-11 | 1.4e-07 | 31.5 |
| pfu_aug2.0_1557.1_25001.t1 | 4 | 3 | EF-hand_1 | 115 | 140 | 8.7e-13 | 46.5 | 6.8e-06 | 0.01 | 15.1 |
| pfu_aug2.0_1557.1_25001.t1 | 5 | 4 | EF-hand_6 | 115 | 139 | 1.8e-11 | 42.8 | 4.1e-06 | 0.006 | 16.3 |
| pfu_aug2.0_1557.1_25001.t1 | 2 | 2 | EF-hand_9 | 115 | 175 | 2.4e-06 | 27.3 | 1.2e-07 | 0.00018 | 21.3 |
| pfu_aug2.0_1557.1_25001.t1 | 3 | 2 | EF-hand_5 | 116 | 131 | 9.2e-09 | 34.2 | 0.0012 | 1.8 | 8.0 |
| pfu_aug2.0_1557.1_25001.t1 | 4 | 4 | EF-hand_8 | 135 | 167 | 2.8e-08 | 33.2 | 6.4e-06 | 0.0096 | 15.5 |
| pfu_aug2.0_1557.1_25001.t1 | 4 | 4 | EF-hand_1 | 149 | 175 | 8.7e-13 | 46.5 | 6.8e-08 | 0.0001 | 21.3 |
| pfu_aug2.0_1557.1_25001.t1 | 3 | 3 | EF-hand_5 | 154 | 173 | 9.2e-09 | 34.2 | 2.2e-06 | 0.0032 | 16.7 |
| pfu_aug2.0_1557.1_25001.t1 | 5 | 5 | EF-hand_6 | 156 | 175 | 1.8e-11 | 42.8 | 2.5e-05 | 0.037 | 13.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1557.1_25001.t1 | gi|514695657|ref|XP_004995399.1| | centrin [Salpingoeca rosetta] | 6.0e-13 |
| pfu_aug2.0_1557.1_25001.t1 | gi|657587550|ref|XP_008298072.1| | PREDICTED: centrin-2 [Stegastes partitus] | 2.0e-12 |
| pfu_aug2.0_1557.1_25001.t1 | gi|545207338|ref|XP_005607014.1| | PREDICTED: calmodulin-like protein 5 [Equus caballus] | 2.0e-12 |
| pfu_aug2.0_1557.1_25001.t1 | gi|664716203|ref|XP_008515096.1| | PREDICTED: calmodulin-like protein 5 [Equus przewalskii] | 5.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1557.1_25001.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1557.1_25001.t1 atggcttccaaacttctgaagtcgaagaaacagcaattggacattgacgatgtgtttttcctcgctgacgacgacgaaga cggcttcctagactatgatgagttgaagaaagctttagaggccataggccacaaaatgcgaacgcaagaactgagcgact tacttgatgagttttctcatggacatgagggacatataaatcagacgcagttccgtgctttggtgggatataaattcgcc aaacgatgtgggatccacagcaatttcgtagccttgaaagctttatttaaaagttacaaaggcaaaggctcggaagcaac agaaagaaacggtgacgtttttactctcttcaaaatgtttgactatgatcggaaagggcacgttagtaagaagaaactga aagaaggcttcaaaaaattaacagggtcagaaatagcagatgatgacctggatgtgatgatggaacaagcagatgagaac ggagacggacatattgatatctatgatttcgagagagttctcaataccaattacttcccagacgaggattaa |
|
Protein
| Protein ID | pfu_aug2.0_1557.1_25001.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1557.1_25001.t1 MASKLLKSKKQQLDIDDVFFLADDDEDGFLDYDELKKALEAIGHKMRTQELSDLLDEFSHGHEGHINQTQFRALVGYKFA KRCGIHSNFVALKALFKSYKGKGSEATERNGDVFTLFKMFDYDRKGHVSKKKLKEGFKKLTGSEIADDDLDVMMEQADEN GDGHIDIYDFERVLNTNYFPDED |
|