Gene
| Gene Model ID | pfu_aug2.0_156.1_20337 |
|---|---|
| Locus | scaffold156.1 : 1 ... 52164 : + |
| To GenomeBrowser | scaffold156.1:1..52164 |
| Genes list of scaffold | scaffold156.1 |
| Synonym | pfu_aug1.0_4792.1_67059 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_156.1_20337.t1 | 1 | 1 | MFS_1 | 12 | 362 | 5.1e-10 | 38.5 | 5.2e-13 | 1.5e-09 | 37.0 |
| pfu_aug2.0_156.1_20337.t1 | 2 | 1 | VWA | 277 | 305 | 6.0e-23 | 81.4 | 0.53 | 1600.0 | -1.4 |
| pfu_aug2.0_156.1_20337.t1 | 2 | 2 | VWA | 1210 | 1389 | 6.0e-23 | 81.4 | 8.7e-26 | 2.6e-22 | 79.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_156.1_20337.t1 | gi|673051213|ref|XP_008879567.1| | hypothetical protein H310_13717 [Aphanomyces invadans] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_156.1_20337.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20337.t1 gtttttggaaggcgatggtgggttttagcagttttcagtatgtcatgcttcatgcaagccgtgatttggaacacatgggg tcctatcacggagtcagcggaggtggtattcaactggcaggacagtacgataggcatgcttgctaactgggggatcattt cctatatctgtacaatatttcctgcttgttaccttatggacatgaaagggctgaggatatctcttcttctatgtaatttt ttgctggcgttaggaagtggattacgatgtattacctccgatcctcactgggccacatggttgatgaacataggagcgat tattaatggtattgccggcaccgtaccgtacgcaggcccttctctcctagcatccacatggtttcctccaaatcaacgtg ccactgcgactgcagtatcatcggcactaaactactttggtgtgggcatggggtatattatagaatgtgtcgcctcatgt tctttatttcttgccactctgatatacttccctagtaaacctcccactccacctagcaaaacggcttccatacaaagggt agagtacaggagagccctgttggatgcagcaagaaatcgttacctgtggatgttatcccttgcatatgcccttcccatgg gtatttacggagtttggggtggcactctcatggatatcatacttcagcctctcgatattacccagacagatgtaggatgg ataggattttatgccatcatcgccggttgcctgtcatctctcctaatagcaagctcacctgagcgaggctcaagcgagct atatagtcacagcgggccatccgtcgtccgtccgtcccgcgtaaacatttctataattttctatatctcctctgcaaccg atgcacaaaatttcacgaaactctacaggaagcaagtacccaaggtcgtctaccaagtatacgctgcctgcatcattagt ggcatgtgtctgacgggtaccattcctctattctatgagttgtgcagtgaggtagcctaccccgtatctgaaggtgtggc agggggcttcattacccttttccacggtctctttggcttcatatttctactgattcttctcatccctggaataggtatca tgatccttcgaaaagatcacttggcagtcttcatcctaatttcattcatatcatctgcaagttcctttggtttccatgat ctttttggtgcacatgtcgagcccgagcccgaacatcacgtatttgcggaacctttctttccggagcccgaaccggaaca tcagccccaggattgtaaagtatcagagtggggtccttggggacatgttcatcctgatggcaaagtggagaggagaagaa tagtgacttgccctgctaaatacggagggttaccatgtcctccacttgtcgactataaaatagtatcaattgactgtaaa gttggtgagtggtcgccatggactgatgcaggagatgcagggaagagaacaagaaagagagccatcataacgaatcctca atatggtggagagccttgtccagatttagaggacactgactatgttcctatagattgttacctgagtccatggagtgaat ggggacctgttgatgaagccacaggagagagaagacgaacaaggacaatcaccagacatcccatgaatggtggtaaagaa tgtgaagatctggaagatactaaggaagtacctctggattgttacatgagtccctggagtgaatggggacctgtcaagga aaccacaggagagagaagacgaacaaggacaatcaccagacatcccatgaatggtggtaaagaatgtgaagatctggaag atactaaggaagttcctctagattgctatctcagtccatggagtgaatgggggcctattgatcaaactacaggcatcaga cgacgtacaagaacaatcaccaggcacccaatgaacggcgggaaagaatgcgaagatctggaggaaacaaaagaagaacc cttagactgtatactgagtgactggggaccatggggtcctacaaatcaagtcactggggaaagaaagagatcaaggacca ttacccgcaaaccaatgaatggcgggaaagcttgtgatgagctagaagaaactgaccttgaatctctggactgtatactt ggtccctggggagcttggggtcctgtggatcagatcactgggaaaagaaaaagatcaaggactgttacccgcaaaccagt gaatggcgggaaagcttgtgatgagctggaagaaactgaccttgagcctttggactgtatattgagtcaatggagtgaat ggggacctgtagaccaggtaacgggtgagaggaagagaactaggagtataacccgtgatcctgtgaacggtggcaaagag tgtgaggaactagaggaaatggatctagagcctttagattgcatcttaaatccatggggaccttggggaccagtcaacca agtcactggagaaaggcaacggtcgagaacagtgaagcgtaaaccaatgaatggtggagaagaatgtgatgagcttgatg aaactgacttagaacccttagactgtatcttgagtccatggggagcatggggcccaatcaaccaagaaactggtgaaaga agacgatccagaactataaaacgtaaaccagtgaatggcggcaaggaatgtgacgacttagacgatagtgaactcaagcc actgccgtgtttagtatctgattggacaccatggaccgctccaaatgatgaaggtcgggtcttccgtcaaagaaatgtaa caagacctgataaaaatggaggcacagaatgccctgaactggaagattctaaacttgcacaaaatcgatatttcagaaaa tcagaaaccgaaagcatacaaaatcaggataaaacaagaaccaaagcatacaaacaaaaacctccaccatatgaaaagaa gcgatcttccgatatgggagtacctatagactgtgtgatgggtgagtggtcagcgtggaaggacgtagacgaggcaggta atattgcaagatttagagtggtcatctcacaacctaaaaatggcggagacccatgtcccggtacaaaggatatcaaagca gttaaagttgattgtaaggttggcgaatgggaagaatggggtactatacctgacaaacaaggacgagtcagacagtacag agacgttcaacgccaaccactcaatggaggaaaaccttgtccggaaacagaaaggaaaaagaaagttccggttgattgca ttatggatgactggagtgaatggtcggttccaaacagaagaggctggacgaggaggtatcgttacgtcgtacaagaacct cttaatgacggaaaaccatgtggtaaaagatggaacagaaaatctgtacccctggactgccttgtatcaagatgggcaca gtggtcagagacattcgcttttggggatcaagtaaggaggagaaaaatcagaaggaagccctggaacggcggtaaaccat gtccgaaattaatcgatatcagaaaaacagataagatgcctacacccaagaaagtagccgaacatttcggccgccagttt gttaggccggatccacaatatccacgtgacatcatagtcatcattgattcatctggaagtataggaaatgaattgttcaa tcgagcactccgtgatttggcagaacttgttggttacttctgtcctgaacccgatccattcgtaccacaaaacaactcat tttatcatagacttggagtgatacaattttcaaccgaaactgaggacatatttaaccttgatcgttatgataatctcggt gctattcagggcgccatcagatctataaaatacatgcaggagtacacttgtaccgagaaggcgtttgatgcagcatacag aatgatcacccaaaatggaggtgcacgaccacctgctgttgctaagaaacaagtactaattctgacagacggaatgtgga actgcgatggcgatcccgtggcggcgtcgaaaaggctccagaccgtggcagacgtatatggctttatgataggcattaac tctaaagcaggcagacgaaaactggaaaaagtcatcagcgaacccttacttaatcatttatttgccgtcaaagacttcag caagtttaatgtcgtagtaaggcaactacgtacaacaattaaaaggggtcgcttgcaatgttctccttcgatctgtacaa cgatgaaaaccatcattggacggaatcctagcccagtaataaatattcgtaccgattctccagtacagattaagatacag gactctgccaataggtactgggacgatgataatgatgatagtaacgatgatgaggagaagaaatataacatcattttgac caatcctgtctctgtaaaccgcctccatcgttatcaggagaatattcttcaaagacttcggaccgccatggaatcattct ttaaaaggcaatcggtgtag |
|
Protein
| Protein ID | pfu_aug2.0_156.1_20337.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20337.t1 VFGRRWWVLAVFSMSCFMQAVIWNTWGPITESAEVVFNWQDSTIGMLANWGIISYICTIFPACYLMDMKGLRISLLLCNF LLALGSGLRCITSDPHWATWLMNIGAIINGIAGTVPYAGPSLLASTWFPPNQRATATAVSSALNYFGVGMGYIIECVASC SLFLATLIYFPSKPPTPPSKTASIQRVEYRRALLDAARNRYLWMLSLAYALPMGIYGVWGGTLMDIILQPLDITQTDVGW IGFYAIIAGCLSSLLIASSPERGSSELYSHSGPSVVRPSRVNISIIFYISSATDAQNFTKLYRKQVPKVVYQVYAACIIS GMCLTGTIPLFYELCSEVAYPVSEGVAGGFITLFHGLFGFIFLLILLIPGIGIMILRKDHLAVFILISFISSASSFGFHD LFGAHVEPEPEHHVFAEPFFPEPEPEHQPQDCKVSEWGPWGHVHPDGKVERRRIVTCPAKYGGLPCPPLVDYKIVSIDCK VGEWSPWTDAGDAGKRTRKRAIITNPQYGGEPCPDLEDTDYVPIDCYLSPWSEWGPVDEATGERRRTRTITRHPMNGGKE CEDLEDTKEVPLDCYMSPWSEWGPVKETTGERRRTRTITRHPMNGGKECEDLEDTKEVPLDCYLSPWSEWGPIDQTTGIR RRTRTITRHPMNGGKECEDLEETKEEPLDCILSDWGPWGPTNQVTGERKRSRTITRKPMNGGKACDELEETDLESLDCIL GPWGAWGPVDQITGKRKRSRTVTRKPVNGGKACDELEETDLEPLDCILSQWSEWGPVDQVTGERKRTRSITRDPVNGGKE CEELEEMDLEPLDCILNPWGPWGPVNQVTGERQRSRTVKRKPMNGGEECDELDETDLEPLDCILSPWGAWGPINQETGER RRSRTIKRKPVNGGKECDDLDDSELKPLPCLVSDWTPWTAPNDEGRVFRQRNVTRPDKNGGTECPELEDSKLAQNRYFRK SETESIQNQDKTRTKAYKQKPPPYEKKRSSDMGVPIDCVMGEWSAWKDVDEAGNIARFRVVISQPKNGGDPCPGTKDIKA VKVDCKVGEWEEWGTIPDKQGRVRQYRDVQRQPLNGGKPCPETERKKKVPVDCIMDDWSEWSVPNRRGWTRRYRYVVQEP LNDGKPCGKRWNRKSVPLDCLVSRWAQWSETFAFGDQVRRRKIRRKPWNGGKPCPKLIDIRKTDKMPTPKKVAEHFGRQF VRPDPQYPRDIIVIIDSSGSIGNELFNRALRDLAELVGYFCPEPDPFVPQNNSFYHRLGVIQFSTETEDIFNLDRYDNLG AIQGAIRSIKYMQEYTCTEKAFDAAYRMITQNGGARPPAVAKKQVLILTDGMWNCDGDPVAASKRLQTVADVYGFMIGIN SKAGRRKLEKVISEPLLNHLFAVKDFSKFNVVVRQLRTTIKRGRLQCSPSICTTMKTIIGRNPSPVINIRTDSPVQIKIQ DSANRYWDDDNDDSNDDEEKKYNIILTNPVSVNRLHRYQENILQRLRTAMESFFKRQSV |
|