Gene
| Gene Model ID | pfu_aug2.0_156.1_20339 |
|---|---|
| Locus | scaffold156.1 : 100566 ... 128215 : - |
| To GenomeBrowser | scaffold156.1:100566..128215 |
| Genes list of scaffold | scaffold156.1 |
| Synonym | pfu_aug1.0_5860.1_52630 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_156.1_20339.t1 | 3 | 1 | zf-C3Hc3H | 23 | 85 | 1.0e-29 | 102.3 | 6.5e-19 | 9.6e-15 | 54.4 |
| pfu_aug2.0_156.1_20339.t1 | 3 | 2 | zf-C3Hc3H | 181 | 190 | 1.0e-29 | 102.3 | 0.5 | 7500.0 | -3.0 |
| pfu_aug2.0_156.1_20339.t1 | 3 | 3 | zf-C3Hc3H | 270 | 324 | 1.0e-29 | 102.3 | 8.5e-20 | 1.3e-15 | 57.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_156.1_20339.t1 | gi|524902606|ref|XP_005107540.1| | PREDICTED: KAT8 regulatory NSL complex subunit 2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_156.1_20339.t1 | gi|524902616|ref|XP_005107541.1| | PREDICTED: KAT8 regulatory NSL complex subunit 2-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_156.1_20339.t1 | gi|676458959|ref|XP_009055145.1| | hypothetical protein LOTGIDRAFT_189619 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_156.1_20339.t1 | gi|291239644|ref|XP_002739731.1| | PREDICTED: KAT8 regulatory NSL complex subunit 2-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_156.1_20339.t1 | gi|620956025|ref|XP_007660032.1| | PREDICTED: KAT8 regulatory NSL complex subunit 2 isoform X2 [Ornithorhynchus anatinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_156.1_20339.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20339.t1 atgaatcggaaacctaacatgcttgtccatcagaggaagccccgcccacctgttgagggatccttctgtcaatacagtca tagatcatgtatgcacaaccgactagaggggtatgagttttgcctaaaacatatacaagaggataaaaactcaccctata agcagtgtagctatacgtccagtaagagtggaaaacgctgtcagaatgccgcacccaaacaagagagaaaagagggacta tgcctggaacatgctaaaagaagcatcgcaatgcggcatcaagcccaccagaaacggaaacctaaagaaagtgcagagac attattagaaggcctagatcatttcaaattatgtcccgggtctgatggaatatttgaacacaaacgtctgaaaacatcag ctgataatgtagccaataaagcattaggtatgtgtgtttacaggtatgcaggtgtgtacacagcagaggaagttgccctt ataatgagggataagttaatacggctacaatccctgtatatagaccagttcaaacgtctgcagcacattatgaaagagaa acgcaggaaatacctgcacactcacaaacaggagagagaggctttaggcagcataaagtactacaagaatcaacctgagt ccagagaggaatatttcaagttaaaagcactgaaacgataccacaaacgtcatggaaaggaagcccttctacacagacag tccaagcagaggaggatagctgtgtcggaaggtccaaattaccgtcctccctcgtttcctaagtgtattcacatagagga tgacacagcagttaagtgtacagaccgggccatgcctctgaccaaatactgttttaaccacattttagaggacccatacc agaccctctatagggcgtgtcagtttggagggggcacctgtgggatgccagcattcagcttagaggaggatgtgttctgt aacctacatgtgccccttaaacaaatggaaccaagagtatcactgaaaatggaggagcagggtgaggagctcactaaaga agccctggatatgctcctcccacaactcaacttcacacccaatgaaatcatgcatcgtcaacttctcacgcaaaatcctc aaatgccggacaccatcttctctgatctgggagacgttgattctgaggaggcactaaaacattcaaatgactccaatcag tcatttaagtcatcctcatctagttcattgccatcttcatccagacaaaaccttccttctgatatcgcagaaaaaccaaa acccaaatatggaccattgctgctgcagcatttgaaagggacagtaaatctgagtaactatagagacagttaccaagcaa cggaaaccacagtaacaaatagcagcacctcgacctctgacctcggtgacaaggtcacagatagtgaaggtcaggaagtt gcacctactcaaaatgcagacagcaatagtgcaacagattcttcaaatagtttgccaaatgggaacggaaacttggaggg gaatgaaactcagaacggagacgatcaagttatagatatcacggaggatactgacatagatataaacggaaactga |
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Protein
| Protein ID | pfu_aug2.0_156.1_20339.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20339.t1 MNRKPNMLVHQRKPRPPVEGSFCQYSHRSCMHNRLEGYEFCLKHIQEDKNSPYKQCSYTSSKSGKRCQNAAPKQERKEGL CLEHAKRSIAMRHQAHQKRKPKESAETLLEGLDHFKLCPGSDGIFEHKRLKTSADNVANKALGMCVYRYAGVYTAEEVAL IMRDKLIRLQSLYIDQFKRLQHIMKEKRRKYLHTHKQEREALGSIKYYKNQPESREEYFKLKALKRYHKRHGKEALLHRQ SKQRRIAVSEGPNYRPPSFPKCIHIEDDTAVKCTDRAMPLTKYCFNHILEDPYQTLYRACQFGGGTCGMPAFSLEEDVFC NLHVPLKQMEPRVSLKMEEQGEELTKEALDMLLPQLNFTPNEIMHRQLLTQNPQMPDTIFSDLGDVDSEEALKHSNDSNQ SFKSSSSSSLPSSSRQNLPSDIAEKPKPKYGPLLLQHLKGTVNLSNYRDSYQATETTVTNSSTSTSDLGDKVTDSEGQEV APTQNADSNSATDSSNSLPNGNGNLEGNETQNGDDQVIDITEDTDIDINGN |
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