Gene
| Gene Model ID | pfu_aug2.0_156.1_20340 |
|---|---|
| Locus | scaffold156.1 : 131196 ... 154855 : + |
| To GenomeBrowser | scaffold156.1:131196..154855 |
| Genes list of scaffold | scaffold156.1 |
| Synonym | pfu_aug1.0_391.1_58095 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_156.1_20340.t1 | 2 | 1 | Cyclin_N | 2 | 67 | 1.6e-09 | 37.4 | 1.8e-09 | 2.7e-05 | 23.7 |
| pfu_aug2.0_156.1_20340.t1 | 2 | 2 | Cyclin_N | 105 | 163 | 1.6e-09 | 37.4 | 1.6e-05 | 0.23 | 11.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_156.1_20340.t1 | gi|752899231|ref|XP_011267999.1| | PREDICTED: cyclin-T isoform X3 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_156.1_20340.t1 | gi|734613822|ref|XP_010734436.1| | PREDICTED: cyclin-T2-like [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_156.1_20340.t1 | gi|746861236|ref|XP_011061493.1| | PREDICTED: cyclin-T isoform X6 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_156.1_20340.t1 | gi|746861228|ref|XP_011061489.1| | PREDICTED: cyclin-T isoform X2 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_156.1_20340.t1 | gi|749793025|ref|XP_011149787.1| | PREDICTED: cyclin-T isoform X2 [Harpegnathos saltator] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_156.1_20340.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20340.t1 atgtcagcagcctctctgtttttggcagccaaagtagaagaacagccacgtaaactggaacatgtgatacgatgtgccca ttcctgtctgaatagggaagccccgcccctcgacacacagagtaacgcctactttgaacaagcccatgagctggtcatca acgagaacattttgctgcaaactttaggttttgacctttccattgaccatccccatacaaatgttgtcaaaacttgtcag ttagtgagagcaccaagagatttagcccaaacgtcatatttcctagcaactaatagtctccatcttacagccctatgtct acagtacaaacccacagtagtggcctgtgtctgtgtacacctagcttgtaaatggtccaaatgggagattcctattggtc gagaaggtaaagaatggtactactacgtagataaatctgtgaccaaggagctactcgaagaacttactacagaattcttg acaatacttgacagatgtccaaacaaactcaggaaaaaaatcatgacctggaagtccgggaaagatccagatgcactcat gatggcagaccggccaatagaaaaacgatcaaagacggagccatcatctgctgcagggagtgccgaacaagaggtgtcaa tacaccgaccttcgtcatcatcagcaaaacatacgaccaaggaggctcatccttctcaaacgtctcatcagagtcacgga tccgagaagtcacgtaaagaacacgcccaaatcataaagcaagaaaaaccgacttcatcatcaactaagcctaaggaaag ttctgttgtagctgaaaacagacatgttgctgtatctggatcatcagcacctgcctcacagagacaaaacgtgtttgatg cactcacaagcgaggcttttgttaaagaagagaaacctgacttaaatgttaatgtttcaatagctgtacctcctgcttta caaagcgtgccttcagtatctttagccgagtataaagaacgtagagaaagagaacgggcattaacaaaaagtcattctag cgatagcgccttgaaagctaatattaaagctgagccagatgttttaagtgaagcgtccaacaaagagaaggaaaaactga ggaagtcgcacagctcgtcgcatcaccaccggcaccatcacagcaaacatggtgcaggatcagaggggtcctcttcatcc gatcataaaatacgcataaaaacggaaccttcaactagcgctagcacctctagtcagcaagtagatcccaaactcaaact accgtctttaccgaccagtgctgagttagtacaagatctgctgaaagaatcgctctctaaaaattctccttctactgccc ttagtgttacaccttgtgtaaaaactgaagtaaatgtaacagagtcgaagcataggaaggaggcactactaagttcgaat aagcagccctccatgccagatcctaagctcgtcattaaatctgaacctagttccccacaagtgccaagtattagtaaacc agaggtgaaacttaaaataaaaacacatcactcagaaacagggatcactcaaccaggggcgtcccctcttaaacttaaaa taaagacctctcatctaccaaaggaagctcaattttcagacaaaaatggacacaaggaacagaaagtgcctgccttaaaa ctgtcttcacatccatctaggatgaaatctagtgatagtacttcttcctcatctagctcgagttcgtcaaaacatcccca caaatctcataagtcatcaaaatcttcgcactctagttcaagcttaagtaaagggaccaatggaaaagaggacataaaaa tacatatcagtttatcagatattcagaaacaaagcagttcttcggacccagaaaagaaaatttccgaaaagcaccatcgg catgctgagaagtctaggaaagagagaactacctcacaacaagacgccttagttagatccaaatctgatgttaactctcg gaaacgaccacttatgtctcctggtgaagtgccctctaatgacttgtcaagtcactcgaaaagcaaaatacagaaatcta cggaaagtcaaatgcgtcggtctagttccagtcactctgttgttagcatggacatgtcgtcagattctggttctgttgct ggtaatgatatggataatcacatatcggctcacagtataatgcagaatatccaacgtgctattgagcagaaaaaacgaaa catcgcagaaagtcagagtcagaagtcgtcacccgttctgcagcagaacttccctatgtctcagcctcaataccataata caccatttgctcaattatttcaggccgcacctcctcagcccccgcccccaccacccccagatcccccatcagatccacct ccaccaccgcccccgccccctcaagacacatattcctattcaaatagttattccaattcttcccaaccatttgcctatca agaacttggggacattgactttttagaggacgaccctcccctcccagatgaaatccccccagtggctcccccacccccgc cttccaataggtattga |
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Protein
| Protein ID | pfu_aug2.0_156.1_20340.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20340.t1 MSAASLFLAAKVEEQPRKLEHVIRCAHSCLNREAPPLDTQSNAYFEQAHELVINENILLQTLGFDLSIDHPHTNVVKTCQ LVRAPRDLAQTSYFLATNSLHLTALCLQYKPTVVACVCVHLACKWSKWEIPIGREGKEWYYYVDKSVTKELLEELTTEFL TILDRCPNKLRKKIMTWKSGKDPDALMMADRPIEKRSKTEPSSAAGSAEQEVSIHRPSSSSAKHTTKEAHPSQTSHQSHG SEKSRKEHAQIIKQEKPTSSSTKPKESSVVAENRHVAVSGSSAPASQRQNVFDALTSEAFVKEEKPDLNVNVSIAVPPAL QSVPSVSLAEYKERRERERALTKSHSSDSALKANIKAEPDVLSEASNKEKEKLRKSHSSSHHHRHHHSKHGAGSEGSSSS DHKIRIKTEPSTSASTSSQQVDPKLKLPSLPTSAELVQDLLKESLSKNSPSTALSVTPCVKTEVNVTESKHRKEALLSSN KQPSMPDPKLVIKSEPSSPQVPSISKPEVKLKIKTHHSETGITQPGASPLKLKIKTSHLPKEAQFSDKNGHKEQKVPALK LSSHPSRMKSSDSTSSSSSSSSSKHPHKSHKSSKSSHSSSSLSKGTNGKEDIKIHISLSDIQKQSSSSDPEKKISEKHHR HAEKSRKERTTSQQDALVRSKSDVNSRKRPLMSPGEVPSNDLSSHSKSKIQKSTESQMRRSSSSHSVVSMDMSSDSGSVA GNDMDNHISAHSIMQNIQRAIEQKKRNIAESQSQKSSPVLQQNFPMSQPQYHNTPFAQLFQAAPPQPPPPPPPDPPSDPP PPPPPPPQDTYSYSNSYSNSSQPFAYQELGDIDFLEDDPPLPDEIPPVAPPPPPSNRY |
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