Gene
| Gene Model ID | pfu_aug2.0_156.1_20341 |
|---|---|
| Locus | scaffold156.1 : 165112 ... 196882 : - |
| To GenomeBrowser | scaffold156.1:165112..196882 |
| Genes list of scaffold | scaffold156.1 |
| Synonym | pfu_aug1.0_391.1_58093 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_156.1_20341.t1 | 2 | 1 | MATH | 203 | 327 | 3.4e-11 | 43.4 | 3.6e-14 | 1.1e-10 | 41.8 |
| pfu_aug2.0_156.1_20341.t1 | 2 | 1 | BTB | 356 | 460 | 8.8e-33 | 112.6 | 1.8e-35 | 5.2e-32 | 110.1 |
| pfu_aug2.0_156.1_20341.t1 | 2 | 2 | MATH | 449 | 504 | 3.4e-11 | 43.4 | 0.99 | 2900.0 | -1.6 |
| pfu_aug2.0_156.1_20341.t1 | 2 | 2 | BTB | 463 | 491 | 8.8e-33 | 112.6 | 0.088 | 260.0 | 1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_156.1_20341.t1 | gi|524876763|ref|XP_005095091.1| | PREDICTED: protein roadkill-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_156.1_20341.t1 | gi|676458968|ref|XP_009055148.1| | hypothetical protein LOTGIDRAFT_232540 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_156.1_20341.t1 | gi|642913328|ref|XP_008195273.1| | PREDICTED: protein roadkill isoform X4 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_156.1_20341.t1 | gi|642913326|ref|XP_008195269.1| | PREDICTED: protein roadkill isoform X3 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_156.1_20341.t1 | gi|642913322|ref|XP_008195259.1| | PREDICTED: speckle-type POZ protein B isoform X1 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_156.1_20341.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20341.t1 atggtgggtagcgtaacccgtatcaccacccatacatgtaccccaccctgcctccatcaacccattttccaggattacgt gactttgatagggtttctatgatttttatcatgtgttcataaaaacatagcaaataaaccttttacgccgaggtggaatg agcgatactccttaaacgtagcagatactcatacaacgcaacaccaacgtagctcttacgtagcaggaacgaaaagaacg tatagttcgtacgccatgcatacgcaggagtacatcgaagaaacgaaaaagaagaaattgaaacgtgtaccatacgtagt agataagaaaagaacgccgcgggtacgaattggcaacgccttcggggtgcctgtcggcagtccagacaccagtatacccc tatcatacctagtagccttactacagtgtaccaaagaaacggacaacctggatcgtgaggcgtcctcagtaccggatcat tccgggaggatgtccatcacggggagggtacccactccccctcccccggagatgtcgtgtcctgtagccgagaactggtg ctatactcaagtgaaagtggtgaaattttcctatatatggacaatcaataacttcagtttctgtcgagaagaaatgggag aggtgctgaaaagttcaacgttctccgcaggggccaatgacaaattaaagtggtgcctgagagttaatccaaagggtctg gatgaagaaagcaaagactatttatccctgtatttattattagtgtcgtgtaataagagtgaagtgcgagcaaaattcaa gttttccattttaaatgcaaagcgagaggaaacaaaagcaatggagagtcagcgtgcctacagatttgttcaaggcaaag actggggctttaaaaaattcatccgacgtgattttttgatggatgaagcgaatggtctcctgcccgatgataaattaacg atattctgtgaagtatcggtagttggtgacactgtgaatgtatctggccagtcaaactgtacaccagttaaggttcctga atgtcgactcagcgaggacctgggcactctgtttgagaggtcgtcgtttagtgacgtcacactctgtgtgggaggtcgag aattccaggctcacaaagccatcttagcagcgcgttctcctgtatataatgcgatgtttgaacatgaaatggaagaaaga aaacagaatcgagtggagattactgatgtggatcatgaagtcatgagagaaatgttgagatttatatatacgggaaaagc tccgaatttggacaaaatggcggacgatttactggcagcagcagataaatatgcgttagagaggttaaaggtgatgtgtg aagaagctctgtgttcaaatctacagatagataatgtgtgtgaagtcctagtcctggccgatcttcatagtgccgatcaa ctcaaaacacatgccattgatttcataaatagtcatgccacagatgttatggacacgcagggatggaagacgttgattca gagtcatccacatctcatagccgatgctttccgcgccctggccagtcaacaaagcccgcccctctgtcctccaagaaaac gtgtcaaaacttcatag |
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Protein
| Protein ID | pfu_aug2.0_156.1_20341.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20341.t1 MVGSVTRITTHTCTPPCLHQPIFQDYVTLIGFLXFLSCVHKNIANKPFTPRWNERYSLNVADTHTTQHQRSSYVAGTKRT YSSYAMHTQEYIEETKKKKLKRVPYVVDKKRTPRVRIGNAFGVPVGSPDTSIPLSYLVALLQCTKETDNLDREASSVPDH SGRMSITGRVPTPPPPEMSCPVAENWCYTQVKVVKFSYIWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGL DEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLMDEANGLLPDDKLT IFCEVSVVGDTVNVSGQSNCTPVKVPECRLSEDLGTLFERSSFSDVTLCVGGREFQAHKAILAARSPVYNAMFEHEMEER KQNRVEITDVDHEVMREMLRFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEEALCSNLQIDNVCEVLVLADLHSADQ LKTHAIDFINSHATDVMDTQGWKTLIQSHPHLIADAFRALASQQSPPLCPPRKRVKTS |
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