Gene
| Gene Model ID | pfu_aug2.0_156.1_20343 |
|---|---|
| Locus | scaffold156.1 : 219483 ... 238023 : + |
| To GenomeBrowser | scaffold156.1:219483..238023 |
| Genes list of scaffold | scaffold156.1 |
| Synonym | pfu_aug1.0_38307.1_55650 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_156.1_20343.t1 | 1 | 1 | RUN | 34 | 156 | 1.0e-25 | 90.0 | 1.6e-29 | 2.3e-25 | 88.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_156.1_20343.t1 | gi|676458971|ref|XP_009055149.1| | hypothetical protein LOTGIDRAFT_118736 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_156.1_20343.t1 | gi|556985792|ref|XP_005998555.1| | PREDICTED: RUN domain-containing protein 3B [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_156.1_20343.t1 | gi|507931372|ref|XP_004676929.1| | PREDICTED: RUN domain-containing protein 3B isoform X4 [Condylura cristata] | 0.0 |
| pfu_aug2.0_156.1_20343.t1 | gi|632960699|ref|XP_007896343.1| | PREDICTED: RUN domain-containing protein 3B [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_156.1_20343.t1 | gi|701333272|ref|XP_009979234.1| | PREDICTED: RUN domain-containing protein 3B [Tauraco erythrolophus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_156.1_20343.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20343.t1 atgcaacgtttcatggtttactctgtaatatttgccataaagacccttatagacaaagcttctttgggaaatgttgacga caacaatgaggagttgataaatttctgtgctgttatagaagaggttctctctttccgccttagagctgccaggacatggt atggctcgggggaacccagagcattctgggattacatacaacaaagctgtcataaagtaccaaataattgtatacgcagt attgctagccttgaaaatatcaaatcacctattgccaagggtagagcatggatcaggtgtgcactgatggagaagagatt gtcagagtatatcagtgtagctttacaacaaaccaatatcaccagacagagttatttagacggtgccgtgatgctttcag atgacatcagcactctatgtggagaacttctgggactgaatgctatagacttcagcttctgtttaaaaggagaaacattg gattttcccagtcctgtaatgatagactacactccttacttaaagttcaaacaaagtccagagagtatagaagaggacca tgctgagttgagtgtattaaataggaacaaccaatcaaatgattcgatagatggtattgaaattgatctccatgacaaca accaatgggaagaaagatacaaagcccttgagtcaaaattcaaactggccaatgaacaaaagggataccttgaggagtta gtaagacgacgtgaatatcagatccaggagacaaacaaacagagagtaacggcactaaatacactaaaacaatggcaggt ggataataaacaggagagatcccaactagagactgttatactcgagttacagaatcaagttgaagaaatgagaaagcaga aggaatactttgaacataaataccagggaatgatggagaggatccagggctcccagatggccatggaagatataagtggt atgacccacctcacagacagtgatactgacaagctaagcttcagctctggagaaggatcaagcacaatgccattaagaaa atcctacatgcctctgggaccaaccaggaaacacctgtacaccaaagaggacacacctagcatgaaggctctggcaggct catttacgtcacaaggaagtgaccaatcatcttcactgatacatcaaaccaaagttcaaggatcaccaccaaccaatcaa aatctttcctctgaaagaagcttggccaatcaaacattaggtgctactgaagtattggcatcaacagtgaatgattcaga taatgtcacaagtgaaataccactgttaagtacaagcgggcataataaagagggagaatcaaacacgggacatggtacaa attcagttagcagtggaaaatctaaagaagagacaaaaaaggaagattcagtggaagtttcatgtcaaaaagaagatgat ttgaagacatgtgaagaagacaacaaaaaggttttgggtaaagatagcgatgaagaattggctgttatttctcacggaga tattgatgatgatgagacagaggatgctaaggatgtagagaatgaaagtgaaagtacaaatgaagaattatcgcaacaga aaatgaaagtaagtgatattgagagttcttcaggtaaagacaatgaacagagagaaatcgtagatccaggtacggagaaa acgagtgatattggggaagaaaaagtatcaaccaccagtagcgaagagaatgactttgtaatgcttcctacccatgggga agatgatagtcatggggtgttgtcgatgaatgaatccacagatagtaacggaagcgagtcacccaggctcagcgagaggc atcagtcacctacagacactgctgctacaggggaacagtga |
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Protein
| Protein ID | pfu_aug2.0_156.1_20343.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20343.t1 MQRFMVYSVIFAIKTLIDKASLGNVDDNNEELINFCAVIEEVLSFRLRAARTWYGSGEPRAFWDYIQQSCHKVPNNCIRS IASLENIKSPIAKGRAWIRCALMEKRLSEYISVALQQTNITRQSYLDGAVMLSDDISTLCGELLGLNAIDFSFCLKGETL DFPSPVMIDYTPYLKFKQSPESIEEDHAELSVLNRNNQSNDSIDGIEIDLHDNNQWEERYKALESKFKLANEQKGYLEEL VRRREYQIQETNKQRVTALNTLKQWQVDNKQERSQLETVILELQNQVEEMRKQKEYFEHKYQGMMERIQGSQMAMEDISG MTHLTDSDTDKLSFSSGEGSSTMPLRKSYMPLGPTRKHLYTKEDTPSMKALAGSFTSQGSDQSSSLIHQTKVQGSPPTNQ NLSSERSLANQTLGATEVLASTVNDSDNVTSEIPLLSTSGHNKEGESNTGHGTNSVSSGKSKEETKKEDSVEVSCQKEDD LKTCEEDNKKVLGKDSDEELAVISHGDIDDDETEDAKDVENESESTNEELSQQKMKVSDIESSSGKDNEQREIVDPGTEK TSDIGEEKVSTTSSEENDFVMLPTHGEDDSHGVLSMNESTDSNGSESPRLSERHQSPTDTAATGEQ |
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