Gene
| Gene Model ID | pfu_aug2.0_156.1_20344 |
|---|---|
| Locus | scaffold156.1 : 249363 ... 272050 : + |
| To GenomeBrowser | scaffold156.1:249363..272050 |
| Genes list of scaffold | scaffold156.1 |
| Synonym | pfu_aug1.0_45707.1_48602 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_156.1_20344.t1 | 5 | 1 | Kelch_4 | 10 | 30 | 3.6e-24 | 84.2 | 0.16 | 390.0 | 0.9 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 1 | Kelch_3 | 10 | 40 | 5.0e-23 | 80.6 | 0.0035 | 8.6 | 6.6 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 1 | Kelch_1 | 10 | 21 | 4.8e-14 | 51.6 | 0.0067 | 17.0 | 5.0 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 1 | Kelch_6 | 10 | 24 | 2.7e-11 | 43.1 | 0.21 | 520.0 | 1.0 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 1 | Kelch_2 | 10 | 24 | 4.4e-09 | 35.7 | 0.2 | 480.0 | 0.7 |
| pfu_aug2.0_156.1_20344.t1 | 4 | 1 | Kelch_5 | 30 | 63 | 4.3e-15 | 55.2 | 0.00081 | 2.0 | 8.4 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 2 | Kelch_2 | 33 | 74 | 4.4e-09 | 35.7 | 4.7e-06 | 0.012 | 15.3 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 2 | Kelch_1 | 34 | 75 | 4.8e-14 | 51.6 | 3.7e-05 | 0.091 | 12.3 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 2 | Kelch_6 | 34 | 76 | 2.7e-11 | 43.1 | 5.2e-05 | 0.13 | 12.5 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 2 | Kelch_4 | 35 | 74 | 3.6e-24 | 84.2 | 8.0e-08 | 0.0002 | 21.0 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 2 | Kelch_3 | 42 | 86 | 5.0e-23 | 80.6 | 4.8e-07 | 0.0012 | 18.9 |
| pfu_aug2.0_156.1_20344.t1 | 4 | 2 | Kelch_5 | 83 | 110 | 4.3e-15 | 55.2 | 3.3e-06 | 0.0082 | 16.0 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 3 | Kelch_4 | 90 | 107 | 3.6e-24 | 84.2 | 0.00074 | 1.8 | 8.3 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 3 | Kelch_1 | 94 | 122 | 4.8e-14 | 51.6 | 0.00096 | 2.4 | 7.7 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 3 | Kelch_6 | 94 | 107 | 2.7e-11 | 43.1 | 0.0012 | 3.1 | 8.1 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 3 | Kelch_3 | 95 | 162 | 5.0e-23 | 80.6 | 2.9e-07 | 0.00072 | 19.6 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 3 | Kelch_2 | 95 | 112 | 4.4e-09 | 35.7 | 0.056 | 140.0 | 2.4 |
| pfu_aug2.0_156.1_20344.t1 | 4 | 3 | Kelch_5 | 151 | 189 | 4.3e-15 | 55.2 | 1.6e-08 | 3.9e-05 | 23.4 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 4 | Kelch_4 | 155 | 198 | 3.6e-24 | 84.2 | 6.7e-13 | 1.7e-09 | 37.3 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 4 | Kelch_6 | 156 | 197 | 2.7e-11 | 43.1 | 2.2e-06 | 0.0055 | 16.8 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 4 | Kelch_2 | 158 | 198 | 4.4e-09 | 35.7 | 1.1e-05 | 0.027 | 14.2 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 4 | Kelch_1 | 164 | 198 | 4.8e-14 | 51.6 | 2.4e-06 | 0.0059 | 16.1 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 4 | Kelch_3 | 166 | 213 | 5.0e-23 | 80.6 | 3.9e-11 | 9.7e-08 | 31.9 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 5 | Kelch_4 | 205 | 228 | 3.6e-24 | 84.2 | 4.0e-07 | 0.00098 | 18.8 |
| pfu_aug2.0_156.1_20344.t1 | 4 | 4 | Kelch_5 | 205 | 226 | 4.3e-15 | 55.2 | 0.029 | 71.0 | 3.5 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 5 | Kelch_6 | 209 | 224 | 2.7e-11 | 43.1 | 0.058 | 140.0 | 2.8 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 5 | Kelch_2 | 209 | 225 | 4.4e-09 | 35.7 | 0.12 | 290.0 | 1.4 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 5 | Kelch_1 | 210 | 231 | 4.8e-14 | 51.6 | 0.0093 | 23.0 | 4.6 |
| pfu_aug2.0_156.1_20344.t1 | 5 | 5 | Kelch_3 | 218 | 226 | 5.0e-23 | 80.6 | 0.14 | 350.0 | 1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_156.1_20344.t1 | gi|676471619|ref|XP_009059232.1| | hypothetical protein LOTGIDRAFT_218243 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_156.1_20344.t1 | gi|291225005|ref|XP_002732492.1| | PREDICTED: kelch domain-containing protein 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_156.1_20344.t1 | gi|683894849|ref|XP_009099842.1| | PREDICTED: kelch domain-containing protein 2 [Serinus canaria] | 0.0 |
| pfu_aug2.0_156.1_20344.t1 | gi|564356189|ref|XP_006240232.1| | PREDICTED: kelch domain-containing protein 1 isoform X2 [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_156.1_20344.t1 | gi|558151487|ref|XP_006120786.1| | PREDICTED: kelch domain-containing protein 2 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_156.1_20344.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20344.t1 atgattggtatctacctgctagagattttctggatttatgacacagaattcaaaacatgggatgtgttacaagtggaggt caccagtcctcctggcctctcagggtcaacagccagtatccatggtgatgacctttatctgtttgctgggcatggtcgcc aaggaaatatcaatgacctatatcactttaacctgcgtaagagagaatgggagttgttgtcaagttataaagaagaatac tctaatccatcccctagggacaaggctgttagctggatttataacaataaattttactgttttggtggatttgggcctcc gttacaagggtttttatcagagaatggaaaattcacatcagacgactcaagttatcctacacgtggatggaacaaccagc ttttagaatatgatattagtaaaaagaaatgattgacaacagagggtaacataccagagggtcgttcatggcattccctt tctgcactggacgatggtcgtctgtttatgtatggtggatttaacactagctgccagcctctcagtgatgcttggaccct tgaccttttgaccttacaatggagccagctgaagcatgtacctggtgatcgtccccgtctctggcataccgcctgcgtca caccgtcacaggaagtggtcattcatggaggatgctccaacaatattcttgattaccaaatacaaacagaacatcgtagt gatgtgatacatatacagacacagccttactcacttctcaggatatgtttagactgtgtctttgcgtacagagacagaac aataagtgaatgggacagtctacctgtgaatctctctcttcatttaaagaaacaaaaagaagctacggaatatttagcga attcaatgttagctagaggggagcatgacgaggacaatccatctggtgctacatgtgccgtatcgtga |
|
Protein
| Protein ID | pfu_aug2.0_156.1_20344.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20344.t1 MIGIYLLEIFWIYDTEFKTWDVLQVEVTSPPGLSGSTASIHGDDLYLFAGHGRQGNINDLYHFNLRKREWELLSSYKEEY SNPSPRDKAVSWIYNNKFYCFGGFGPPLQGFLSENGKFTSDDSSYPTRGWNNQLLEYDISKKKXLTTEGNIPEGRSWHSL SALDDGRLFMYGGFNTSCQPLSDAWTLDLLTLQWSQLKHVPGDRPRLWHTACVTPSQEVVIHGGCSNNILDYQIQTEHRS DVIHIQTQPYSLLRICLDCVFAYRDRTISEWDSLPVNLSLHLKKQKEATEYLANSMLARGEHDEDNPSGATCAVS |
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