Gene
| Gene Model ID | pfu_aug2.0_156.1_20346 |
|---|---|
| Locus | scaffold156.1 : 301353 ... 314738 : + |
| To GenomeBrowser | scaffold156.1:301353..314738 |
| Genes list of scaffold | scaffold156.1 |
| Synonym | pfu_aug1.0_88.1_57960 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_156.1_20346.t1 | 1 | 1 | PDZ | 2 | 64 | 4.6e-06 | 26.7 | 5.0e-09 | 1.2e-05 | 25.3 |
| pfu_aug2.0_156.1_20346.t1 | 2 | 1 | DUF3401 | 135 | 238 | 8.0e-14 | 51.6 | 6.0 | 15000.0 | -10.6 |
| pfu_aug2.0_156.1_20346.t1 | 2 | 2 | DUF3401 | 435 | 672 | 8.0e-14 | 51.6 | 3.2e-17 | 8.0e-14 | 51.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_156.1_20346.t1 | gi|663293602|ref|XP_008502547.1| | PREDICTED: signal-induced proliferation-associated 1-like protein 1, partial [Calypte anna] | 2.0e-28 |
| pfu_aug2.0_156.1_20346.t1 | gi|548420479|ref|XP_005742483.1| | PREDICTED: signal-induced proliferation-associated 1-like protein 2-like isoform X3 [Pundamilia nyererei] | 5.0e-28 |
| pfu_aug2.0_156.1_20346.t1 | gi|542199325|ref|XP_005473979.1| | PREDICTED: signal-induced proliferation-associated 1-like protein 2-like isoform X4 [Oreochromis niloticus] | 5.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_156.1_20346.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20346.t1 atgggacagttaggtttccatgtgcaatctgaaggtgttgtaacagatgttgaaaagtttggatttgcttgggatgcaga cctgaagaaaggcagccgattggtggaaatttgtaaagtcgctacggcaacattaacgcatgaacaaattgtggacttgt tacggacatctgcaactgttaaagtcacagttataccacctttagaagatggaaccccacggggtgttgctacattaaac actaattgtcactccacgtccctcaccactctgaaagcagcgtgtaaagccaccgaaaatattcaacaaagacagaaaga ggtgcagttcacaaagaggtcatgggacggtgacatgcactcaaatcacagagatctgtgtaaaacatcttcggactctt ctgaatacttggaaaaacataaaaaagacattgattctatcactaaaagctcgtccgagtatctcagtgtacaacaacag atagaggaattttccaagcttctaggctctgacgagttcctgtcaaagaatgtaaaagaggtgtcaaaaagcaatcaaga ggtacatgtatcccatcatcctagagacctatcccatcatgcaagggaggtatcccgtcatacacgagaggtgtctcatc tgtccagcagctccacagagctgtcctaccagctcatggaatcaagtctgtccatatctacgacgagccaggagatgtct cactcagccattaatctccaccgtagggactcgagaaaatcctcaagttctagcgaaatcactgccagcccaacgattcg tgatgcaccgaagaattttgatatccctcagcagcgtggctcactaacattgccactacagaaaaaacctgccacaccaa ctagaggtgaatcacgtaattctccaagtcataatttcctgcctcagaatcgtcccctggcaacatcgagcttacagcgt aactcctcccttcaccacgcctatacagactccgccctctctagtaggaccaccagctcgtacgatgaggggtataactc ccgacacaccacctcagataatattttccccggtgaggatgtacgtcatgagaggacggggtccagggacagctctgact atatctacataagtgcagatgatgtggccagaaagagggcagacctatcctccactaacagtaaggggaggccaggggtg gggcccagtggacacacccacagaaaacctcatcttgaagtctctccactcagtagtgaaaacagcagtccaaggtcttc acataaaaatctctcaggaatgtcatcagaggaatctcttaactctcgtttacgtcccggtgtgacgggtcgccccacca aggcccagtctaacgatcaactacaggaggaactcaaacatctcatcaacctagaaatcaacaacagtgaccttagggga ctactgtcccaggcccctgaccgatcctctatccgcctcactcgtacaatgtcagatgagagtctacatggttttaaagg agccactgttaatccctcaaggggagataactcctctgatgtcctattcacagtagcaccacctgtgcctgcactgccaa aggaagtccttaaagatcaaagattatcccctcgtgctatgtatgacgatgccctctcagctaaagctcgtcagatactt agtcgtcacagtcccaatgctcccaataataacgtccctctaccggaatctacagccggactcgactggtcaaacctcgt caatgtagcaaccaaagcaatagaaagtacagatagttccccaaccaagtcccaaacctccagtacctctgtcagtagtg taaccagagatgtgaagaagaccccagcccctcagcagcctgtgacctccaaagatcagaagacctccctacagacagct actaactacagtagtgctgctcctgtttggaggtcagtggcagccaatccccagcagcgaatccaggagctagaaaccaa agtagagcagctcgaacgtgaacttgatcaggtattgttcatttgtataatttcatgctcatatgaaatcttttttgatg gtgattga |
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Protein
| Protein ID | pfu_aug2.0_156.1_20346.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20346.t1 MGQLGFHVQSEGVVTDVEKFGFAWDADLKKGSRLVEICKVATATLTHEQIVDLLRTSATVKVTVIPPLEDGTPRGVATLN TNCHSTSLTTLKAACKATENIQQRQKEVQFTKRSWDGDMHSNHRDLCKTSSDSSEYLEKHKKDIDSITKSSSEYLSVQQQ IEEFSKLLGSDEFLSKNVKEVSKSNQEVHVSHHPRDLSHHAREVSRHTREVSHLSSSSTELSYQLMESSLSISTTSQEMS HSAINLHRRDSRKSSSSSEITASPTIRDAPKNFDIPQQRGSLTLPLQKKPATPTRGESRNSPSHNFLPQNRPLATSSLQR NSSLHHAYTDSALSSRTTSSYDEGYNSRHTTSDNIFPGEDVRHERTGSRDSSDYIYISADDVARKRADLSSTNSKGRPGV GPSGHTHRKPHLEVSPLSSENSSPRSSHKNLSGMSSEESLNSRLRPGVTGRPTKAQSNDQLQEELKHLINLEINNSDLRG LLSQAPDRSSIRLTRTMSDESLHGFKGATVNPSRGDNSSDVLFTVAPPVPALPKEVLKDQRLSPRAMYDDALSAKARQIL SRHSPNAPNNNVPLPESTAGLDWSNLVNVATKAIESTDSSPTKSQTSSTSVSSVTRDVKKTPAPQQPVTSKDQKTSLQTA TNYSSAAPVWRSVAANPQQRIQELETKVEQLERELDQVLFICIISCSYEIFFDGD |
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