Gene
| Gene Model ID | pfu_aug2.0_156.1_20347 |
|---|---|
| Locus | scaffold156.1 : 315483 ... 319692 : + |
| To GenomeBrowser | scaffold156.1:315483..319692 |
| Genes list of scaffold | scaffold156.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_156.1_20347.t1 | 1 | 1 | IncA | 51 | 131 | 1.6e-07 | 31.1 | 8.6e-10 | 1.8e-07 | 30.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_156.1_20347.t1 | gi|260830507|ref|XP_002610202.1| | hypothetical protein BRAFLDRAFT_77024 [Branchiostoma floridae] | 2.0e-21 |
| pfu_aug2.0_156.1_20347.t1 | gi|545870107|ref|XP_003483522.2| | PREDICTED: signal-induced proliferation-associated 1-like protein 2-like [Sus scrofa] | 2.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_156.1_20347.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20347.t1 atggcaagacaggggtgtttttactgtgcttgtggtacagatagttccccaaccaagtcccaaacctccagtacctctgt cagtagtgtaaccagagatgtgaagaagaccccagcccctcagcagcctgtgacctccaaagaccaaaagacctccctac agacagctactaactacagtagtgctgctcctgtatggaggtcagtggcagccaatccccagcagcgaatccaggagcta gaaaccaaagtagagcagctcgaacgtgaacttgatcaggagcagaaagaaaatgcatcgttagaggcagaagtccaaga actacgagccgaaaatgttcgcctacaagaggaatcccaaacagcggcagcacagttacgcaaatttaccgagtggtttt ttcagacaatagacagacagtga |
|
Protein
| Protein ID | pfu_aug2.0_156.1_20347.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20347.t1 MARQGCFYCACGTDSSPTKSQTSSTSVSSVTRDVKKTPAPQQPVTSKDQKTSLQTATNYSSAAPVWRSVAANPQQRIQEL ETKVEQLERELDQEQKENASLEAEVQELRAENVRLQEESQTAAAQLRKFTEWFFQTIDRQ |
|